Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC060766.5-201ENST00000590539 871 ntBASIC18.89■□□□□ 0.61
BEST3Q8N1M1 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
BEST3Q8N1M1 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
BEST3Q8N1M1 AC066615.1-201ENST00000640911 628 ntBASIC18.89■□□□□ 0.61
BEST3Q8N1M1 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
BEST3Q8N1M1 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.89■□□□□ 0.61
BEST3Q8N1M1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.89■□□□□ 0.61
BEST3Q8N1M1 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
BEST3Q8N1M1 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.89■□□□□ 0.61
BEST3Q8N1M1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
BEST3Q8N1M1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
BEST3Q8N1M1 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BEST3Q8N1M1 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.89■□□□□ 0.61
BEST3Q8N1M1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.88■□□□□ 0.61
BEST3Q8N1M1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.88■□□□□ 0.61
BEST3Q8N1M1 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BEST3Q8N1M1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BEST3Q8N1M1 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
BEST3Q8N1M1 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
BEST3Q8N1M1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BEST3Q8N1M1 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BEST3Q8N1M1 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.88■□□□□ 0.61
BEST3Q8N1M1 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.88■□□□□ 0.61
BEST3Q8N1M1 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.88■□□□□ 0.61
BEST3Q8N1M1 AC006058.3-201ENST00000606217 1069 ntBASIC18.88■□□□□ 0.61
BEST3Q8N1M1 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BEST3Q8N1M1 HLA-B-256ENST00000639848 1089 ntBASIC18.88■□□□□ 0.61
BEST3Q8N1M1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BEST3Q8N1M1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.88■□□□□ 0.61
BEST3Q8N1M1 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BEST3Q8N1M1 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
BEST3Q8N1M1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
BEST3Q8N1M1 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BEST3Q8N1M1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
BEST3Q8N1M1 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
BEST3Q8N1M1 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.88■□□□□ 0.61
BEST3Q8N1M1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BEST3Q8N1M1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
BEST3Q8N1M1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.87■□□□□ 0.61
BEST3Q8N1M1 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
BEST3Q8N1M1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
BEST3Q8N1M1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
BEST3Q8N1M1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BEST3Q8N1M1 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.87■□□□□ 0.61
BEST3Q8N1M1 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
BEST3Q8N1M1 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
BEST3Q8N1M1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BEST3Q8N1M1 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BEST3Q8N1M1 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.87■□□□□ 0.61
BEST3Q8N1M1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
BEST3Q8N1M1 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
BEST3Q8N1M1 AC026366.1-201ENST00000488803 879 ntBASIC18.87■□□□□ 0.61
BEST3Q8N1M1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
BEST3Q8N1M1 AP003097.1-201ENST00000530657 1135 ntBASIC18.87■□□□□ 0.61
BEST3Q8N1M1 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.87■□□□□ 0.61
BEST3Q8N1M1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
BEST3Q8N1M1 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
BEST3Q8N1M1 AC087633.2-202ENST00000565166 1439 ntBASIC18.87■□□□□ 0.61
BEST3Q8N1M1 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.87■□□□□ 0.61
BEST3Q8N1M1 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BEST3Q8N1M1 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
BEST3Q8N1M1 Z98882.1-201ENST00000622160 2253 ntBASIC18.86■□□□□ 0.61
BEST3Q8N1M1 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BEST3Q8N1M1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.86■□□□□ 0.61
BEST3Q8N1M1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
BEST3Q8N1M1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.86■□□□□ 0.61
BEST3Q8N1M1 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
BEST3Q8N1M1 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
BEST3Q8N1M1 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
BEST3Q8N1M1 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
BEST3Q8N1M1 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.86■□□□□ 0.61
BEST3Q8N1M1 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
BEST3Q8N1M1 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.86■□□□□ 0.61
BEST3Q8N1M1 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.86■□□□□ 0.61
BEST3Q8N1M1 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BEST3Q8N1M1 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
BEST3Q8N1M1 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.86■□□□□ 0.61
BEST3Q8N1M1 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.86■□□□□ 0.61
BEST3Q8N1M1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.86■□□□□ 0.61
BEST3Q8N1M1 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
BEST3Q8N1M1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.85■□□□□ 0.61
BEST3Q8N1M1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
BEST3Q8N1M1 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.85■□□□□ 0.61
BEST3Q8N1M1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
BEST3Q8N1M1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.85■□□□□ 0.61
BEST3Q8N1M1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BEST3Q8N1M1 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BEST3Q8N1M1 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.85■□□□□ 0.61
BEST3Q8N1M1 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BEST3Q8N1M1 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BEST3Q8N1M1 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.85■□□□□ 0.61
BEST3Q8N1M1 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BEST3Q8N1M1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.85■□□□□ 0.61
BEST3Q8N1M1 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
BEST3Q8N1M1 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BEST3Q8N1M1 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BEST3Q8N1M1 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BEST3Q8N1M1 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
BEST3Q8N1M1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BEST3Q8N1M1 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms