Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC116Q8IYX3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CCDC116Q8IYX3 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC116Q8IYX3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC116Q8IYX3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC116Q8IYX3 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC116Q8IYX3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC116Q8IYX3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC116Q8IYX3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CCDC116Q8IYX3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC116Q8IYX3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC116Q8IYX3 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC116Q8IYX3 AC007322.1-201ENST00000426983 750 ntBASIC19.18■□□□□ 0.66
CCDC116Q8IYX3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.18■□□□□ 0.66
CCDC116Q8IYX3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC116Q8IYX3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC116Q8IYX3 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.18■□□□□ 0.66
CCDC116Q8IYX3 AC231657.2-201ENST00000624556 255 ntBASIC19.18■□□□□ 0.66
CCDC116Q8IYX3 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.18■□□□□ 0.66
CCDC116Q8IYX3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC116Q8IYX3 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC116Q8IYX3 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC116Q8IYX3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC116Q8IYX3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.18■□□□□ 0.66
CCDC116Q8IYX3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC116Q8IYX3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC116Q8IYX3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
CCDC116Q8IYX3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC116Q8IYX3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC116Q8IYX3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC116Q8IYX3 AC073130.3-201ENST00000624389 2278 ntBASIC19.17■□□□□ 0.66
CCDC116Q8IYX3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CCDC116Q8IYX3 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC116Q8IYX3 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC116Q8IYX3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
CCDC116Q8IYX3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.17■□□□□ 0.66
CCDC116Q8IYX3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC116Q8IYX3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
CCDC116Q8IYX3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC116Q8IYX3 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC116Q8IYX3 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC116Q8IYX3 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CCDC116Q8IYX3 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CCDC116Q8IYX3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC116Q8IYX3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC116Q8IYX3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC116Q8IYX3 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC116Q8IYX3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC116Q8IYX3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC116Q8IYX3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC116Q8IYX3 AC092720.2-201ENST00000602388 1665 ntBASIC19.17■□□□□ 0.66
CCDC116Q8IYX3 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.17■□□□□ 0.66
CCDC116Q8IYX3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC116Q8IYX3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC116Q8IYX3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC116Q8IYX3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC116Q8IYX3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
CCDC116Q8IYX3 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC116Q8IYX3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC116Q8IYX3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC116Q8IYX3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC116Q8IYX3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC116Q8IYX3 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC116Q8IYX3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC116Q8IYX3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CCDC116Q8IYX3 AL137784.2-201ENST00000607332 1000 ntBASIC19.16■□□□□ 0.66
CCDC116Q8IYX3 AC080038.1-201ENST00000611274 1154 ntBASIC19.16■□□□□ 0.66
CCDC116Q8IYX3 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC116Q8IYX3 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC116Q8IYX3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC116Q8IYX3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC116Q8IYX3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC116Q8IYX3 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC116Q8IYX3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CCDC116Q8IYX3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC116Q8IYX3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC116Q8IYX3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC116Q8IYX3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.15■□□□□ 0.66
CCDC116Q8IYX3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC116Q8IYX3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CCDC116Q8IYX3 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC116Q8IYX3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC116Q8IYX3 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC116Q8IYX3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC116Q8IYX3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC116Q8IYX3 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC116Q8IYX3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC116Q8IYX3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CCDC116Q8IYX3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC116Q8IYX3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC116Q8IYX3 KRT8P36-201ENST00000489121 1440 ntBASIC19.15■□□□□ 0.66
CCDC116Q8IYX3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC116Q8IYX3 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC116Q8IYX3 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC116Q8IYX3 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC116Q8IYX3 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC116Q8IYX3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC116Q8IYX3 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC116Q8IYX3 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CCDC116Q8IYX3 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms