Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC22.63■■□□□ 1.21
DHX40Q8IX18 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
DHX40Q8IX18 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
DHX40Q8IX18 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
DHX40Q8IX18 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC22.63■■□□□ 1.21
DHX40Q8IX18 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
DHX40Q8IX18 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
DHX40Q8IX18 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
DHX40Q8IX18 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
DHX40Q8IX18 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
DHX40Q8IX18 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
DHX40Q8IX18 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
DHX40Q8IX18 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
DHX40Q8IX18 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
DHX40Q8IX18 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
DHX40Q8IX18 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
DHX40Q8IX18 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC22.62■■□□□ 1.21
DHX40Q8IX18 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC22.62■■□□□ 1.21
DHX40Q8IX18 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
DHX40Q8IX18 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC22.62■■□□□ 1.21
DHX40Q8IX18 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
DHX40Q8IX18 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC22.62■■□□□ 1.21
DHX40Q8IX18 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
DHX40Q8IX18 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
DHX40Q8IX18 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC22.61■■□□□ 1.21
DHX40Q8IX18 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC22.61■■□□□ 1.21
DHX40Q8IX18 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
DHX40Q8IX18 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
DHX40Q8IX18 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
DHX40Q8IX18 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
DHX40Q8IX18 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
DHX40Q8IX18 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
DHX40Q8IX18 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
DHX40Q8IX18 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.61■■□□□ 1.21
DHX40Q8IX18 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.61■■□□□ 1.21
DHX40Q8IX18 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC22.61■■□□□ 1.21
DHX40Q8IX18 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC22.61■■□□□ 1.21
DHX40Q8IX18 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
DHX40Q8IX18 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
DHX40Q8IX18 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
DHX40Q8IX18 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC22.6■■□□□ 1.21
DHX40Q8IX18 KRT16P2-201ENST00000414673 1423 ntBASIC22.6■■□□□ 1.21
DHX40Q8IX18 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
DHX40Q8IX18 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
DHX40Q8IX18 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
DHX40Q8IX18 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC22.6■■□□□ 1.21
DHX40Q8IX18 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.6■■□□□ 1.21
DHX40Q8IX18 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
DHX40Q8IX18 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC22.6■■□□□ 1.21
DHX40Q8IX18 AL691432.2-201ENST00000607222 2038 ntBASIC22.6■■□□□ 1.21
DHX40Q8IX18 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC22.6■■□□□ 1.21
DHX40Q8IX18 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC22.6■■□□□ 1.21
DHX40Q8IX18 KRT87P-202ENST00000534226 1464 ntBASIC22.6■■□□□ 1.21
DHX40Q8IX18 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
DHX40Q8IX18 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
DHX40Q8IX18 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
DHX40Q8IX18 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
DHX40Q8IX18 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
DHX40Q8IX18 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC22.59■■□□□ 1.21
DHX40Q8IX18 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
DHX40Q8IX18 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
DHX40Q8IX18 AC116050.2-201ENST00000612102 1779 ntBASIC22.59■■□□□ 1.21
DHX40Q8IX18 BX323043.1-201ENST00000641006 1765 ntBASIC22.59■■□□□ 1.21
DHX40Q8IX18 IRS3P-201ENST00000223076 1006 ntBASIC22.59■■□□□ 1.21
DHX40Q8IX18 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.59■■□□□ 1.21
DHX40Q8IX18 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
DHX40Q8IX18 AC026271.2-201ENST00000428091 497 ntBASIC22.59■■□□□ 1.21
DHX40Q8IX18 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
DHX40Q8IX18 AC245052.3-201ENST00000450182 901 ntBASIC22.59■■□□□ 1.21
DHX40Q8IX18 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.59■■□□□ 1.21
DHX40Q8IX18 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
DHX40Q8IX18 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
DHX40Q8IX18 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC22.59■■□□□ 1.21
DHX40Q8IX18 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
DHX40Q8IX18 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
DHX40Q8IX18 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
DHX40Q8IX18 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC22.58■■□□□ 1.21
DHX40Q8IX18 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
DHX40Q8IX18 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
DHX40Q8IX18 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC22.58■■□□□ 1.21
DHX40Q8IX18 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC22.58■■□□□ 1.21
DHX40Q8IX18 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
DHX40Q8IX18 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC22.58■■□□□ 1.21
DHX40Q8IX18 SERP1-208ENST00000491660 830 ntTSL 2 BASIC22.58■■□□□ 1.21
DHX40Q8IX18 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.58■■□□□ 1.21
DHX40Q8IX18 AC138907.5-202ENST00000569484 235 ntBASIC22.58■■□□□ 1.21
DHX40Q8IX18 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC22.58■■□□□ 1.21
DHX40Q8IX18 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC22.58■■□□□ 1.21
DHX40Q8IX18 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
DHX40Q8IX18 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
DHX40Q8IX18 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
DHX40Q8IX18 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC22.58■■□□□ 1.2
DHX40Q8IX18 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
DHX40Q8IX18 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
DHX40Q8IX18 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
DHX40Q8IX18 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
DHX40Q8IX18 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
DHX40Q8IX18 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
DHX40Q8IX18 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
DHX40Q8IX18 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms