Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC14.29□□□□□ -0.12
CSMD3Q7Z407 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSMD3Q7Z407 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC14.29□□□□□ -0.12
CSMD3Q7Z407 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CSMD3Q7Z407 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC14.29□□□□□ -0.12
CSMD3Q7Z407 CRYGFP-201ENST00000418459 633 ntBASIC14.29□□□□□ -0.12
CSMD3Q7Z407 AP000525.1-201ENST00000608286 694 ntBASIC14.29□□□□□ -0.12
CSMD3Q7Z407 GLDC-219ENST00000640208 420 ntTSL 2 BASIC14.29□□□□□ -0.12
CSMD3Q7Z407 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CSMD3Q7Z407 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC14.28□□□□□ -0.12
CSMD3Q7Z407 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CSMD3Q7Z407 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC14.28□□□□□ -0.12
CSMD3Q7Z407 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC14.28□□□□□ -0.12
CSMD3Q7Z407 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.28□□□□□ -0.12
CSMD3Q7Z407 FDX2-207ENST00000494368 584 ntTSL 4 BASIC14.28□□□□□ -0.12
CSMD3Q7Z407 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC14.28□□□□□ -0.12
CSMD3Q7Z407 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CSMD3Q7Z407 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CSMD3Q7Z407 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC14.28□□□□□ -0.12
CSMD3Q7Z407 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC14.28□□□□□ -0.12
CSMD3Q7Z407 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC14.28□□□□□ -0.12
CSMD3Q7Z407 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC14.28□□□□□ -0.12
CSMD3Q7Z407 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CSMD3Q7Z407 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CSMD3Q7Z407 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CSMD3Q7Z407 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CSMD3Q7Z407 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CSMD3Q7Z407 AC245052.3-201ENST00000450182 901 ntBASIC14.28□□□□□ -0.12
CSMD3Q7Z407 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC14.28□□□□□ -0.12
CSMD3Q7Z407 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC14.28□□□□□ -0.12
CSMD3Q7Z407 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CSMD3Q7Z407 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CSMD3Q7Z407 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CSMD3Q7Z407 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CSMD3Q7Z407 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CSMD3Q7Z407 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC14.27□□□□□ -0.12
CSMD3Q7Z407 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC14.27□□□□□ -0.12
CSMD3Q7Z407 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CSMD3Q7Z407 AC110285.5-201ENST00000611501 352 ntBASIC14.27□□□□□ -0.12
CSMD3Q7Z407 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
CSMD3Q7Z407 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CSMD3Q7Z407 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC14.27□□□□□ -0.12
CSMD3Q7Z407 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CSMD3Q7Z407 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC14.27□□□□□ -0.12
CSMD3Q7Z407 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CSMD3Q7Z407 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CSMD3Q7Z407 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CSMD3Q7Z407 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CSMD3Q7Z407 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC14.27□□□□□ -0.13
CSMD3Q7Z407 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CSMD3Q7Z407 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CSMD3Q7Z407 UNC93B2-201ENST00000285383 730 ntBASIC14.27□□□□□ -0.13
CSMD3Q7Z407 PRR31-201ENST00000371629 978 ntTSL 2 BASIC14.27□□□□□ -0.13
CSMD3Q7Z407 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CSMD3Q7Z407 UPK3BP1-201ENST00000428678 509 ntBASIC14.27□□□□□ -0.13
CSMD3Q7Z407 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC14.27□□□□□ -0.13
CSMD3Q7Z407 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CSMD3Q7Z407 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC14.27□□□□□ -0.13
CSMD3Q7Z407 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC14.27□□□□□ -0.13
CSMD3Q7Z407 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.27□□□□□ -0.13
CSMD3Q7Z407 KRT16P5-201ENST00000455284 522 ntBASIC14.27□□□□□ -0.13
CSMD3Q7Z407 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC14.27□□□□□ -0.13
CSMD3Q7Z407 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.27□□□□□ -0.13
CSMD3Q7Z407 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
CSMD3Q7Z407 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD3Q7Z407 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC14.26□□□□□ -0.13
CSMD3Q7Z407 FAM99A-202ENST00000538190 1989 ntBASIC14.26□□□□□ -0.13
CSMD3Q7Z407 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD3Q7Z407 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD3Q7Z407 FAM197Y1-201ENST00000421178 764 ntBASIC14.26□□□□□ -0.13
CSMD3Q7Z407 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC14.26□□□□□ -0.13
CSMD3Q7Z407 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD3Q7Z407 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD3Q7Z407 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC14.26□□□□□ -0.13
CSMD3Q7Z407 AL390955.1-201ENST00000428694 934 ntBASIC14.26□□□□□ -0.13
CSMD3Q7Z407 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.26□□□□□ -0.13
CSMD3Q7Z407 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC14.26□□□□□ -0.13
CSMD3Q7Z407 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD3Q7Z407 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CSMD3Q7Z407 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD3Q7Z407 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC14.26□□□□□ -0.13
CSMD3Q7Z407 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD3Q7Z407 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC14.26□□□□□ -0.13
CSMD3Q7Z407 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC14.26□□□□□ -0.13
CSMD3Q7Z407 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CSMD3Q7Z407 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC14.25□□□□□ -0.13
CSMD3Q7Z407 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CSMD3Q7Z407 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CSMD3Q7Z407 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CSMD3Q7Z407 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC14.25□□□□□ -0.13
CSMD3Q7Z407 AL353807.1-201ENST00000427475 662 ntBASIC14.25□□□□□ -0.13
CSMD3Q7Z407 ISCU-203ENST00000431221 799 ntTSL 2 BASIC14.25□□□□□ -0.13
CSMD3Q7Z407 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC14.25□□□□□ -0.13
CSMD3Q7Z407 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC14.25□□□□□ -0.13
CSMD3Q7Z407 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC14.25□□□□□ -0.13
CSMD3Q7Z407 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CSMD3Q7Z407 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CSMD3Q7Z407 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CSMD3Q7Z407 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CSMD3Q7Z407 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms