Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VPS13CQ709C8 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VPS13CQ709C8 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VPS13CQ709C8 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.12■□□□□ 0.33
VPS13CQ709C8 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VPS13CQ709C8 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
VPS13CQ709C8 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VPS13CQ709C8 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.12■□□□□ 0.33
VPS13CQ709C8 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
VPS13CQ709C8 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.12■□□□□ 0.33
VPS13CQ709C8 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VPS13CQ709C8 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VPS13CQ709C8 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
VPS13CQ709C8 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
VPS13CQ709C8 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.11■□□□□ 0.33
VPS13CQ709C8 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.11■□□□□ 0.33
VPS13CQ709C8 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VPS13CQ709C8 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
VPS13CQ709C8 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.11■□□□□ 0.33
VPS13CQ709C8 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VPS13CQ709C8 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
VPS13CQ709C8 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
VPS13CQ709C8 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VPS13CQ709C8 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
VPS13CQ709C8 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
VPS13CQ709C8 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
VPS13CQ709C8 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.11■□□□□ 0.33
VPS13CQ709C8 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VPS13CQ709C8 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.11■□□□□ 0.33
VPS13CQ709C8 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VPS13CQ709C8 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VPS13CQ709C8 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
VPS13CQ709C8 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.11■□□□□ 0.33
VPS13CQ709C8 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.11■□□□□ 0.33
VPS13CQ709C8 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VPS13CQ709C8 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VPS13CQ709C8 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VPS13CQ709C8 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
VPS13CQ709C8 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VPS13CQ709C8 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.1■□□□□ 0.33
VPS13CQ709C8 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VPS13CQ709C8 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VPS13CQ709C8 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
VPS13CQ709C8 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.1■□□□□ 0.33
VPS13CQ709C8 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.1■□□□□ 0.33
VPS13CQ709C8 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
VPS13CQ709C8 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VPS13CQ709C8 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VPS13CQ709C8 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VPS13CQ709C8 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.1■□□□□ 0.33
VPS13CQ709C8 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VPS13CQ709C8 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
VPS13CQ709C8 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VPS13CQ709C8 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.1■□□□□ 0.33
VPS13CQ709C8 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.1■□□□□ 0.33
VPS13CQ709C8 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
VPS13CQ709C8 AC010947.1-201ENST00000623454 693 ntBASIC17.1■□□□□ 0.33
VPS13CQ709C8 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VPS13CQ709C8 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
VPS13CQ709C8 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.1■□□□□ 0.33
VPS13CQ709C8 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
VPS13CQ709C8 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
VPS13CQ709C8 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VPS13CQ709C8 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VPS13CQ709C8 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VPS13CQ709C8 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS13CQ709C8 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
VPS13CQ709C8 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VPS13CQ709C8 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS13CQ709C8 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.09■□□□□ 0.33
VPS13CQ709C8 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS13CQ709C8 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.09■□□□□ 0.33
VPS13CQ709C8 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS13CQ709C8 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS13CQ709C8 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS13CQ709C8 CDV3P1-201ENST00000471403 739 ntBASIC17.09■□□□□ 0.33
VPS13CQ709C8 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.09■□□□□ 0.33
VPS13CQ709C8 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
VPS13CQ709C8 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS13CQ709C8 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VPS13CQ709C8 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.09■□□□□ 0.33
VPS13CQ709C8 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
VPS13CQ709C8 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VPS13CQ709C8 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.08■□□□□ 0.33
VPS13CQ709C8 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VPS13CQ709C8 NTF6B-201ENST00000591913 560 ntBASIC17.08■□□□□ 0.33
VPS13CQ709C8 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.08■□□□□ 0.33
VPS13CQ709C8 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
VPS13CQ709C8 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VPS13CQ709C8 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
VPS13CQ709C8 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
VPS13CQ709C8 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
VPS13CQ709C8 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
VPS13CQ709C8 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.08■□□□□ 0.32
VPS13CQ709C8 AL121894.2-201ENST00000602977 491 ntBASIC17.08■□□□□ 0.32
VPS13CQ709C8 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.08■□□□□ 0.32
VPS13CQ709C8 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
VPS13CQ709C8 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
VPS13CQ709C8 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
VPS13CQ709C8 KRASP1-201ENST00000407852 552 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms