Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTCRAQ6ISU1 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.17■□□□□ 0.98
PTCRAQ6ISU1 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.17■□□□□ 0.98
PTCRAQ6ISU1 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PTCRAQ6ISU1 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21.17■□□□□ 0.98
PTCRAQ6ISU1 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC21.17■□□□□ 0.98
PTCRAQ6ISU1 KRT126P-201ENST00000549467 1181 ntBASIC21.17■□□□□ 0.98
PTCRAQ6ISU1 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.17■□□□□ 0.98
PTCRAQ6ISU1 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.17■□□□□ 0.98
PTCRAQ6ISU1 AC004264.1-201ENST00000608354 794 ntBASIC21.17■□□□□ 0.98
PTCRAQ6ISU1 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
PTCRAQ6ISU1 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTCRAQ6ISU1 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PTCRAQ6ISU1 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.17■□□□□ 0.98
PTCRAQ6ISU1 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTCRAQ6ISU1 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTCRAQ6ISU1 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.16■□□□□ 0.98
PTCRAQ6ISU1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.16■□□□□ 0.98
PTCRAQ6ISU1 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTCRAQ6ISU1 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTCRAQ6ISU1 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTCRAQ6ISU1 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTCRAQ6ISU1 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PTCRAQ6ISU1 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC21.16■□□□□ 0.98
PTCRAQ6ISU1 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTCRAQ6ISU1 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.16■□□□□ 0.98
PTCRAQ6ISU1 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.16■□□□□ 0.98
PTCRAQ6ISU1 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.16■□□□□ 0.98
PTCRAQ6ISU1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.16■□□□□ 0.98
PTCRAQ6ISU1 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.16■□□□□ 0.98
PTCRAQ6ISU1 AC026471.6-201ENST00000622954 1905 ntBASIC21.16■□□□□ 0.98
PTCRAQ6ISU1 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.15■□□□□ 0.98
PTCRAQ6ISU1 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.15■□□□□ 0.98
PTCRAQ6ISU1 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTCRAQ6ISU1 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PTCRAQ6ISU1 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PTCRAQ6ISU1 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTCRAQ6ISU1 AC116562.2-201ENST00000507042 360 ntBASIC21.15■□□□□ 0.98
PTCRAQ6ISU1 KRT18P56-201ENST00000507275 550 ntBASIC21.15■□□□□ 0.98
PTCRAQ6ISU1 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PTCRAQ6ISU1 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.15■□□□□ 0.98
PTCRAQ6ISU1 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC21.15■□□□□ 0.98
PTCRAQ6ISU1 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PTCRAQ6ISU1 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.15■□□□□ 0.98
PTCRAQ6ISU1 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTCRAQ6ISU1 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PTCRAQ6ISU1 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PTCRAQ6ISU1 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PTCRAQ6ISU1 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PTCRAQ6ISU1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.14■□□□□ 0.98
PTCRAQ6ISU1 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PTCRAQ6ISU1 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PTCRAQ6ISU1 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
PTCRAQ6ISU1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PTCRAQ6ISU1 AC010542.4-201ENST00000563151 1910 ntBASIC21.14■□□□□ 0.98
PTCRAQ6ISU1 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTCRAQ6ISU1 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTCRAQ6ISU1 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.14■□□□□ 0.97
PTCRAQ6ISU1 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTCRAQ6ISU1 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.14■□□□□ 0.97
PTCRAQ6ISU1 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.14■□□□□ 0.97
PTCRAQ6ISU1 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.14■□□□□ 0.97
PTCRAQ6ISU1 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.14■□□□□ 0.97
PTCRAQ6ISU1 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
PTCRAQ6ISU1 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.14■□□□□ 0.97
PTCRAQ6ISU1 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.14■□□□□ 0.97
PTCRAQ6ISU1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
PTCRAQ6ISU1 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTCRAQ6ISU1 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PTCRAQ6ISU1 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTCRAQ6ISU1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTCRAQ6ISU1 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTCRAQ6ISU1 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTCRAQ6ISU1 GUK1-204ENST00000366721 689 ntTSL 3 BASIC21.13■□□□□ 0.97
PTCRAQ6ISU1 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21.13■□□□□ 0.97
PTCRAQ6ISU1 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.13■□□□□ 0.97
PTCRAQ6ISU1 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
PTCRAQ6ISU1 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC21.13■□□□□ 0.97
PTCRAQ6ISU1 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.13■□□□□ 0.97
PTCRAQ6ISU1 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PTCRAQ6ISU1 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.13■□□□□ 0.97
PTCRAQ6ISU1 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.13■□□□□ 0.97
PTCRAQ6ISU1 CR392000.1-201ENST00000624770 1228 ntBASIC21.13■□□□□ 0.97
PTCRAQ6ISU1 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.13■□□□□ 0.97
PTCRAQ6ISU1 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTCRAQ6ISU1 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.13■□□□□ 0.97
PTCRAQ6ISU1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.13■□□□□ 0.97
PTCRAQ6ISU1 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PTCRAQ6ISU1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
PTCRAQ6ISU1 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTCRAQ6ISU1 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PTCRAQ6ISU1 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
PTCRAQ6ISU1 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.13■□□□□ 0.97
PTCRAQ6ISU1 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTCRAQ6ISU1 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTCRAQ6ISU1 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.12■□□□□ 0.97
PTCRAQ6ISU1 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTCRAQ6ISU1 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.12■□□□□ 0.97
PTCRAQ6ISU1 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTCRAQ6ISU1 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms