Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRK2Q5S007 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRK2Q5S007 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
LRRK2Q5S007 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.86■□□□□ 0.45
LRRK2Q5S007 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRRK2Q5S007 KSR1P1-201ENST00000446298 240 ntBASIC17.86■□□□□ 0.45
LRRK2Q5S007 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.86■□□□□ 0.45
LRRK2Q5S007 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.86■□□□□ 0.45
LRRK2Q5S007 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
LRRK2Q5S007 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
LRRK2Q5S007 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRK2Q5S007 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRK2Q5S007 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRK2Q5S007 CYP21A1P-202ENST00000354927 1481 ntBASIC17.86■□□□□ 0.45
LRRK2Q5S007 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.86■□□□□ 0.45
LRRK2Q5S007 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
LRRK2Q5S007 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.86■□□□□ 0.45
LRRK2Q5S007 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRK2Q5S007 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRK2Q5S007 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRK2Q5S007 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRRK2Q5S007 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.85■□□□□ 0.45
LRRK2Q5S007 AC092053.2-201ENST00000640557 1818 ntBASIC17.85■□□□□ 0.45
LRRK2Q5S007 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRRK2Q5S007 LIN28AP1-201ENST00000429574 405 ntBASIC17.85■□□□□ 0.45
LRRK2Q5S007 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
LRRK2Q5S007 ECEL1P2-202ENST00000465689 757 ntBASIC17.85■□□□□ 0.45
LRRK2Q5S007 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.85■□□□□ 0.45
LRRK2Q5S007 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.85■□□□□ 0.45
LRRK2Q5S007 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRK2Q5S007 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRRK2Q5S007 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRRK2Q5S007 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRK2Q5S007 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRK2Q5S007 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.84■□□□□ 0.45
LRRK2Q5S007 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.84■□□□□ 0.45
LRRK2Q5S007 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.84■□□□□ 0.45
LRRK2Q5S007 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
LRRK2Q5S007 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRK2Q5S007 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.84■□□□□ 0.45
LRRK2Q5S007 AC116407.4-201ENST00000623319 1061 ntBASIC17.84■□□□□ 0.45
LRRK2Q5S007 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
LRRK2Q5S007 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRK2Q5S007 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRRK2Q5S007 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
LRRK2Q5S007 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRK2Q5S007 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRK2Q5S007 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.84■□□□□ 0.45
LRRK2Q5S007 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.84■□□□□ 0.45
LRRK2Q5S007 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.84■□□□□ 0.45
LRRK2Q5S007 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.84■□□□□ 0.45
LRRK2Q5S007 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.84■□□□□ 0.45
LRRK2Q5S007 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.84■□□□□ 0.45
LRRK2Q5S007 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRRK2Q5S007 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRK2Q5S007 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRK2Q5S007 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRRK2Q5S007 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRRK2Q5S007 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
LRRK2Q5S007 AC092647.4-201ENST00000457211 535 ntBASIC17.83■□□□□ 0.45
LRRK2Q5S007 YBX1P2-201ENST00000489612 999 ntBASIC17.83■□□□□ 0.45
LRRK2Q5S007 KRT18P16-201ENST00000510337 1294 ntBASIC17.83■□□□□ 0.45
LRRK2Q5S007 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.83■□□□□ 0.45
LRRK2Q5S007 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.83■□□□□ 0.45
LRRK2Q5S007 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRRK2Q5S007 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRRK2Q5S007 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRRK2Q5S007 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRRK2Q5S007 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRRK2Q5S007 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LRRK2Q5S007 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.83■□□□□ 0.44
LRRK2Q5S007 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.83■□□□□ 0.44
LRRK2Q5S007 SLC25A1P4-201ENST00000567977 778 ntBASIC17.83■□□□□ 0.44
LRRK2Q5S007 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LRRK2Q5S007 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.44
LRRK2Q5S007 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRRK2Q5S007 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRRK2Q5S007 AC087742.1-201ENST00000575880 1738 ntBASIC17.83■□□□□ 0.44
LRRK2Q5S007 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.82■□□□□ 0.44
LRRK2Q5S007 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRRK2Q5S007 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRRK2Q5S007 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.82■□□□□ 0.44
LRRK2Q5S007 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRRK2Q5S007 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRK2Q5S007 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRRK2Q5S007 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.82■□□□□ 0.44
LRRK2Q5S007 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRRK2Q5S007 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.82■□□□□ 0.44
LRRK2Q5S007 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
LRRK2Q5S007 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.82■□□□□ 0.44
LRRK2Q5S007 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRRK2Q5S007 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRRK2Q5S007 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRK2Q5S007 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
LRRK2Q5S007 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.81■□□□□ 0.44
LRRK2Q5S007 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.81■□□□□ 0.44
LRRK2Q5S007 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.81■□□□□ 0.44
LRRK2Q5S007 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.81■□□□□ 0.44
LRRK2Q5S007 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRK2Q5S007 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms