Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC23.43■■□□□ 1.34
USH1GQ495M9 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
USH1GQ495M9 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
USH1GQ495M9 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
USH1GQ495M9 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
USH1GQ495M9 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
USH1GQ495M9 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
USH1GQ495M9 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC23.42■■□□□ 1.34
USH1GQ495M9 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
USH1GQ495M9 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
USH1GQ495M9 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
USH1GQ495M9 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC23.42■■□□□ 1.34
USH1GQ495M9 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
USH1GQ495M9 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC23.42■■□□□ 1.34
USH1GQ495M9 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
USH1GQ495M9 REXO2-208ENST00000539754 791 ntTSL 2 BASIC23.42■■□□□ 1.34
USH1GQ495M9 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC23.42■■□□□ 1.34
USH1GQ495M9 SOX15-203ENST00000570788 1093 ntBASIC23.42■■□□□ 1.34
USH1GQ495M9 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
USH1GQ495M9 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC23.42■■□□□ 1.34
USH1GQ495M9 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC23.41■■□□□ 1.34
USH1GQ495M9 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
USH1GQ495M9 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
USH1GQ495M9 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.41■■□□□ 1.34
USH1GQ495M9 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
USH1GQ495M9 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
USH1GQ495M9 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
USH1GQ495M9 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC23.41■■□□□ 1.34
USH1GQ495M9 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC23.41■■□□□ 1.34
USH1GQ495M9 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC23.41■■□□□ 1.34
USH1GQ495M9 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC23.41■■□□□ 1.34
USH1GQ495M9 BRWD1-AS2-201ENST00000603064 1028 ntBASIC23.41■■□□□ 1.34
USH1GQ495M9 MIR2861-201ENST00000636310 90 ntBASIC23.41■■□□□ 1.34
USH1GQ495M9 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC23.4■■□□□ 1.34
USH1GQ495M9 AC005229.4-201ENST00000610085 2198 ntBASIC23.4■■□□□ 1.34
USH1GQ495M9 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC23.4■■□□□ 1.34
USH1GQ495M9 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
USH1GQ495M9 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
USH1GQ495M9 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
USH1GQ495M9 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
USH1GQ495M9 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC23.4■■□□□ 1.34
USH1GQ495M9 AC098590.1-201ENST00000468126 897 ntBASIC23.4■■□□□ 1.34
USH1GQ495M9 OR2A1-AS1-207ENST00000486094 819 ntBASIC23.4■■□□□ 1.34
USH1GQ495M9 IRX5-204ENST00000560154 879 ntTSL 5 BASIC23.4■■□□□ 1.34
USH1GQ495M9 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
USH1GQ495M9 AC073648.6-201ENST00000641589 218 ntBASIC23.4■■□□□ 1.34
USH1GQ495M9 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
USH1GQ495M9 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
USH1GQ495M9 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
USH1GQ495M9 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
USH1GQ495M9 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
USH1GQ495M9 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
USH1GQ495M9 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC23.39■■□□□ 1.34
USH1GQ495M9 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.34
USH1GQ495M9 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
USH1GQ495M9 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
USH1GQ495M9 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
USH1GQ495M9 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC23.39■■□□□ 1.33
USH1GQ495M9 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
USH1GQ495M9 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC23.39■■□□□ 1.33
USH1GQ495M9 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC23.39■■□□□ 1.33
USH1GQ495M9 SERP1-205ENST00000487153 657 ntTSL 4 BASIC23.39■■□□□ 1.33
USH1GQ495M9 UNC93B4-201ENST00000505679 747 ntBASIC23.39■■□□□ 1.33
USH1GQ495M9 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC23.39■■□□□ 1.33
USH1GQ495M9 AC066615.1-201ENST00000640911 628 ntBASIC23.39■■□□□ 1.33
USH1GQ495M9 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
USH1GQ495M9 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
USH1GQ495M9 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
USH1GQ495M9 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
USH1GQ495M9 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
USH1GQ495M9 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
USH1GQ495M9 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
USH1GQ495M9 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
USH1GQ495M9 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC23.38■■□□□ 1.33
USH1GQ495M9 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
USH1GQ495M9 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
USH1GQ495M9 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
USH1GQ495M9 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
USH1GQ495M9 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
USH1GQ495M9 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
USH1GQ495M9 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
USH1GQ495M9 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC23.38■■□□□ 1.33
USH1GQ495M9 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
USH1GQ495M9 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
USH1GQ495M9 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC23.38■■□□□ 1.33
USH1GQ495M9 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
USH1GQ495M9 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC23.38■■□□□ 1.33
USH1GQ495M9 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
USH1GQ495M9 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC23.37■■□□□ 1.33
USH1GQ495M9 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
USH1GQ495M9 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
USH1GQ495M9 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
USH1GQ495M9 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
USH1GQ495M9 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
USH1GQ495M9 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
USH1GQ495M9 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
USH1GQ495M9 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC23.37■■□□□ 1.33
USH1GQ495M9 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC23.37■■□□□ 1.33
USH1GQ495M9 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
USH1GQ495M9 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC23.37■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms