Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SHROOM1Q2M3G4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SHROOM1Q2M3G4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC23.91■■□□□ 1.42
SHROOM1Q2M3G4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC23.91■■□□□ 1.42
SHROOM1Q2M3G4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
SHROOM1Q2M3G4 AL023875.1-201ENST00000640777 796 ntBASIC23.91■■□□□ 1.42
SHROOM1Q2M3G4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
SHROOM1Q2M3G4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SHROOM1Q2M3G4 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SHROOM1Q2M3G4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SHROOM1Q2M3G4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC23.91■■□□□ 1.42
SHROOM1Q2M3G4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SHROOM1Q2M3G4 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.9■■□□□ 1.42
SHROOM1Q2M3G4 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.9■■□□□ 1.42
SHROOM1Q2M3G4 AC012676.1-201ENST00000574705 1949 ntBASIC23.9■■□□□ 1.42
SHROOM1Q2M3G4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SHROOM1Q2M3G4 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SHROOM1Q2M3G4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SHROOM1Q2M3G4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.9■■□□□ 1.42
SHROOM1Q2M3G4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SHROOM1Q2M3G4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SHROOM1Q2M3G4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
SHROOM1Q2M3G4 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SHROOM1Q2M3G4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC23.9■■□□□ 1.42
SHROOM1Q2M3G4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC23.9■■□□□ 1.42
SHROOM1Q2M3G4 AC120498.8-201ENST00000614275 531 ntBASIC23.9■■□□□ 1.42
SHROOM1Q2M3G4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SHROOM1Q2M3G4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC23.9■■□□□ 1.42
SHROOM1Q2M3G4 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC23.9■■□□□ 1.42
SHROOM1Q2M3G4 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
SHROOM1Q2M3G4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
SHROOM1Q2M3G4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
SHROOM1Q2M3G4 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
SHROOM1Q2M3G4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
SHROOM1Q2M3G4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
SHROOM1Q2M3G4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC23.89■■□□□ 1.41
SHROOM1Q2M3G4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC23.89■■□□□ 1.41
SHROOM1Q2M3G4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC23.89■■□□□ 1.41
SHROOM1Q2M3G4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.41
SHROOM1Q2M3G4 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
SHROOM1Q2M3G4 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
SHROOM1Q2M3G4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
SHROOM1Q2M3G4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
SHROOM1Q2M3G4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
SHROOM1Q2M3G4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SHROOM1Q2M3G4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SHROOM1Q2M3G4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC23.88■■□□□ 1.41
SHROOM1Q2M3G4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SHROOM1Q2M3G4 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
SHROOM1Q2M3G4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SHROOM1Q2M3G4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SHROOM1Q2M3G4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SHROOM1Q2M3G4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SHROOM1Q2M3G4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC23.88■■□□□ 1.41
SHROOM1Q2M3G4 SNORA78-201ENST00000459373 127 ntBASIC23.88■■□□□ 1.41
SHROOM1Q2M3G4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SHROOM1Q2M3G4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SHROOM1Q2M3G4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
SHROOM1Q2M3G4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC23.88■■□□□ 1.41
SHROOM1Q2M3G4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SHROOM1Q2M3G4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
SHROOM1Q2M3G4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SHROOM1Q2M3G4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
SHROOM1Q2M3G4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC23.87■■□□□ 1.41
SHROOM1Q2M3G4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC23.87■■□□□ 1.41
SHROOM1Q2M3G4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SHROOM1Q2M3G4 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
SHROOM1Q2M3G4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SHROOM1Q2M3G4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SHROOM1Q2M3G4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SHROOM1Q2M3G4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SHROOM1Q2M3G4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC23.87■■□□□ 1.41
SHROOM1Q2M3G4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC23.87■■□□□ 1.41
SHROOM1Q2M3G4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
SHROOM1Q2M3G4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC23.87■■□□□ 1.41
SHROOM1Q2M3G4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
SHROOM1Q2M3G4 AC124016.1-201ENST00000609552 612 ntBASIC23.87■■□□□ 1.41
SHROOM1Q2M3G4 AC027702.1-201ENST00000563810 1770 ntBASIC23.87■■□□□ 1.41
SHROOM1Q2M3G4 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SHROOM1Q2M3G4 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SHROOM1Q2M3G4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC23.87■■□□□ 1.41
SHROOM1Q2M3G4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SHROOM1Q2M3G4 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
SHROOM1Q2M3G4 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.86■■□□□ 1.41
SHROOM1Q2M3G4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SHROOM1Q2M3G4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC23.86■■□□□ 1.41
SHROOM1Q2M3G4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
SHROOM1Q2M3G4 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
SHROOM1Q2M3G4 HES2-206ENST00000489730 730 ntTSL 2 BASIC23.86■■□□□ 1.41
SHROOM1Q2M3G4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SHROOM1Q2M3G4 AC124283.5-201ENST00000624661 1809 ntBASIC23.86■■□□□ 1.41
SHROOM1Q2M3G4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SHROOM1Q2M3G4 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC23.85■■□□□ 1.41
SHROOM1Q2M3G4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SHROOM1Q2M3G4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SHROOM1Q2M3G4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
SHROOM1Q2M3G4 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC23.85■■□□□ 1.41
SHROOM1Q2M3G4 PGM5P4-201ENST00000421970 445 ntBASIC23.85■■□□□ 1.41
SHROOM1Q2M3G4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SHROOM1Q2M3G4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC23.85■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms