Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NKX6-1P78426 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
NKX6-1P78426 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.89■□□□□ 0.45
NKX6-1P78426 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NKX6-1P78426 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.89■□□□□ 0.45
NKX6-1P78426 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NKX6-1P78426 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NKX6-1P78426 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NKX6-1P78426 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NKX6-1P78426 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NKX6-1P78426 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
NKX6-1P78426 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
NKX6-1P78426 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NKX6-1P78426 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NKX6-1P78426 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
NKX6-1P78426 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NKX6-1P78426 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NKX6-1P78426 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.88■□□□□ 0.45
NKX6-1P78426 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.88■□□□□ 0.45
NKX6-1P78426 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NKX6-1P78426 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.88■□□□□ 0.45
NKX6-1P78426 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.88■□□□□ 0.45
NKX6-1P78426 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
NKX6-1P78426 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NKX6-1P78426 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.87■□□□□ 0.45
NKX6-1P78426 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
NKX6-1P78426 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
NKX6-1P78426 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.87■□□□□ 0.45
NKX6-1P78426 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
NKX6-1P78426 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.87■□□□□ 0.45
NKX6-1P78426 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
NKX6-1P78426 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.87■□□□□ 0.45
NKX6-1P78426 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.87■□□□□ 0.45
NKX6-1P78426 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.87■□□□□ 0.45
NKX6-1P78426 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.87■□□□□ 0.45
NKX6-1P78426 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NKX6-1P78426 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NKX6-1P78426 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
NKX6-1P78426 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NKX6-1P78426 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NKX6-1P78426 Z98882.1-201ENST00000622160 2253 ntBASIC17.87■□□□□ 0.45
NKX6-1P78426 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NKX6-1P78426 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NKX6-1P78426 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
NKX6-1P78426 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NKX6-1P78426 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.86■□□□□ 0.45
NKX6-1P78426 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
NKX6-1P78426 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NKX6-1P78426 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
NKX6-1P78426 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NKX6-1P78426 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NKX6-1P78426 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NKX6-1P78426 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
NKX6-1P78426 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NKX6-1P78426 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.86■□□□□ 0.45
NKX6-1P78426 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.86■□□□□ 0.45
NKX6-1P78426 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NKX6-1P78426 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.86■□□□□ 0.45
NKX6-1P78426 AC026366.1-201ENST00000488803 879 ntBASIC17.86■□□□□ 0.45
NKX6-1P78426 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.86■□□□□ 0.45
NKX6-1P78426 AC092667.1-201ENST00000434301 2586 ntBASIC17.86■□□□□ 0.45
NKX6-1P78426 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
NKX6-1P78426 AC010980.2-201ENST00000587099 1412 ntBASIC17.86■□□□□ 0.45
NKX6-1P78426 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NKX6-1P78426 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
NKX6-1P78426 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NKX6-1P78426 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
NKX6-1P78426 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NKX6-1P78426 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.86■□□□□ 0.45
NKX6-1P78426 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NKX6-1P78426 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NKX6-1P78426 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NKX6-1P78426 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NKX6-1P78426 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
NKX6-1P78426 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NKX6-1P78426 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NKX6-1P78426 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.85■□□□□ 0.45
NKX6-1P78426 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
NKX6-1P78426 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.85■□□□□ 0.45
NKX6-1P78426 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NKX6-1P78426 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NKX6-1P78426 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
NKX6-1P78426 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.85■□□□□ 0.45
NKX6-1P78426 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NKX6-1P78426 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.85■□□□□ 0.45
NKX6-1P78426 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.85■□□□□ 0.45
NKX6-1P78426 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NKX6-1P78426 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
NKX6-1P78426 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NKX6-1P78426 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NKX6-1P78426 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NKX6-1P78426 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
NKX6-1P78426 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NKX6-1P78426 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NKX6-1P78426 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NKX6-1P78426 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NKX6-1P78426 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NKX6-1P78426 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
NKX6-1P78426 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NKX6-1P78426 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms