Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
AP1S2P56377 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
AP1S2P56377 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.83■□□□□ 0.76
AP1S2P56377 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.83■□□□□ 0.76
AP1S2P56377 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.83■□□□□ 0.76
AP1S2P56377 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
AP1S2P56377 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
AP1S2P56377 AC092667.1-201ENST00000434301 2586 ntBASIC19.83■□□□□ 0.76
AP1S2P56377 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.83■□□□□ 0.76
AP1S2P56377 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.82■□□□□ 0.76
AP1S2P56377 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP1S2P56377 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
AP1S2P56377 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP1S2P56377 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP1S2P56377 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.82■□□□□ 0.76
AP1S2P56377 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP1S2P56377 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.82■□□□□ 0.76
AP1S2P56377 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.82■□□□□ 0.76
AP1S2P56377 AL356652.1-201ENST00000615962 565 ntBASIC19.82■□□□□ 0.76
AP1S2P56377 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP1S2P56377 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP1S2P56377 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.82■□□□□ 0.76
AP1S2P56377 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP1S2P56377 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.82■□□□□ 0.76
AP1S2P56377 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.82■□□□□ 0.76
AP1S2P56377 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP1S2P56377 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP1S2P56377 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.81■□□□□ 0.76
AP1S2P56377 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.81■□□□□ 0.76
AP1S2P56377 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
AP1S2P56377 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP1S2P56377 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.81■□□□□ 0.76
AP1S2P56377 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
AP1S2P56377 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.81■□□□□ 0.76
AP1S2P56377 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
AP1S2P56377 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
AP1S2P56377 MCRIP2P1-201ENST00000394346 511 ntBASIC19.81■□□□□ 0.76
AP1S2P56377 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
AP1S2P56377 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.81■□□□□ 0.76
AP1S2P56377 IKBKGP1-201ENST00000612193 1073 ntBASIC19.81■□□□□ 0.76
AP1S2P56377 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
AP1S2P56377 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.81■□□□□ 0.76
AP1S2P56377 OR10C1-204ENST00000622521 1039 ntBASIC19.81■□□□□ 0.76
AP1S2P56377 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP1S2P56377 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP1S2P56377 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP1S2P56377 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP1S2P56377 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP1S2P56377 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP1S2P56377 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP1S2P56377 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP1S2P56377 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP1S2P56377 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP1S2P56377 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP1S2P56377 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
AP1S2P56377 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
AP1S2P56377 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP1S2P56377 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.8■□□□□ 0.76
AP1S2P56377 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.8■□□□□ 0.76
AP1S2P56377 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP1S2P56377 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.8■□□□□ 0.76
AP1S2P56377 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.8■□□□□ 0.76
AP1S2P56377 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.8■□□□□ 0.76
AP1S2P56377 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.8■□□□□ 0.76
AP1S2P56377 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.8■□□□□ 0.76
AP1S2P56377 AC080038.1-201ENST00000611274 1154 ntBASIC19.8■□□□□ 0.76
AP1S2P56377 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP1S2P56377 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.8■□□□□ 0.76
AP1S2P56377 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.8■□□□□ 0.76
AP1S2P56377 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP1S2P56377 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP1S2P56377 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP1S2P56377 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
AP1S2P56377 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP1S2P56377 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP1S2P56377 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP1S2P56377 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
AP1S2P56377 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP1S2P56377 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
AP1S2P56377 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
AP1S2P56377 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP1S2P56377 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.79■□□□□ 0.76
AP1S2P56377 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP1S2P56377 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.79■□□□□ 0.76
AP1S2P56377 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.79■□□□□ 0.76
AP1S2P56377 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.79■□□□□ 0.76
AP1S2P56377 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.79■□□□□ 0.76
AP1S2P56377 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.79■□□□□ 0.76
AP1S2P56377 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
AP1S2P56377 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP1S2P56377 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.79■□□□□ 0.76
AP1S2P56377 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
AP1S2P56377 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP1S2P56377 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
AP1S2P56377 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
AP1S2P56377 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP1S2P56377 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP1S2P56377 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP1S2P56377 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.79■□□□□ 0.76
AP1S2P56377 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms