Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SUMO3P55854 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.46■□□□□ 0.55
SUMO3P55854 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SUMO3P55854 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SUMO3P55854 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.46■□□□□ 0.55
SUMO3P55854 LSM12P1-201ENST00000411836 588 ntBASIC18.46■□□□□ 0.55
SUMO3P55854 AL355472.2-201ENST00000422958 438 ntBASIC18.46■□□□□ 0.55
SUMO3P55854 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.46■□□□□ 0.55
SUMO3P55854 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SUMO3P55854 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.46■□□□□ 0.55
SUMO3P55854 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SUMO3P55854 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.46■□□□□ 0.55
SUMO3P55854 AC020907.5-201ENST00000624372 1936 ntBASIC18.46■□□□□ 0.55
SUMO3P55854 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SUMO3P55854 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.46■□□□□ 0.55
SUMO3P55854 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.46■□□□□ 0.55
SUMO3P55854 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SUMO3P55854 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SUMO3P55854 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SUMO3P55854 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SUMO3P55854 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.45■□□□□ 0.54
SUMO3P55854 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SUMO3P55854 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.45■□□□□ 0.54
SUMO3P55854 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SUMO3P55854 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
SUMO3P55854 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SUMO3P55854 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.45■□□□□ 0.54
SUMO3P55854 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.45■□□□□ 0.54
SUMO3P55854 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
SUMO3P55854 TSPY6P-201ENST00000448518 926 ntBASIC18.45■□□□□ 0.54
SUMO3P55854 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SUMO3P55854 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.45■□□□□ 0.54
SUMO3P55854 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.45■□□□□ 0.54
SUMO3P55854 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SUMO3P55854 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SUMO3P55854 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SUMO3P55854 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SUMO3P55854 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SUMO3P55854 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SUMO3P55854 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SUMO3P55854 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SUMO3P55854 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.44■□□□□ 0.54
SUMO3P55854 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.44■□□□□ 0.54
SUMO3P55854 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
SUMO3P55854 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SUMO3P55854 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SUMO3P55854 BX276092.2-201ENST00000417668 665 ntBASIC18.44■□□□□ 0.54
SUMO3P55854 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.44■□□□□ 0.54
SUMO3P55854 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.44■□□□□ 0.54
SUMO3P55854 GUSBP6-202ENST00000438529 1198 ntBASIC18.44■□□□□ 0.54
SUMO3P55854 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.44■□□□□ 0.54
SUMO3P55854 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.44■□□□□ 0.54
SUMO3P55854 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.44■□□□□ 0.54
SUMO3P55854 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SUMO3P55854 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SUMO3P55854 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.44■□□□□ 0.54
SUMO3P55854 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.44■□□□□ 0.54
SUMO3P55854 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.44■□□□□ 0.54
SUMO3P55854 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SUMO3P55854 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SUMO3P55854 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SUMO3P55854 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SUMO3P55854 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SUMO3P55854 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SUMO3P55854 KRT17P1-201ENST00000399211 1546 ntBASIC18.44■□□□□ 0.54
SUMO3P55854 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.43■□□□□ 0.54
SUMO3P55854 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.43■□□□□ 0.54
SUMO3P55854 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SUMO3P55854 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SUMO3P55854 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SUMO3P55854 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SUMO3P55854 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
SUMO3P55854 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SUMO3P55854 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SUMO3P55854 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SUMO3P55854 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.43■□□□□ 0.54
SUMO3P55854 MIPEPP3-201ENST00000412105 444 ntBASIC18.43■□□□□ 0.54
SUMO3P55854 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.43■□□□□ 0.54
SUMO3P55854 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
SUMO3P55854 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.43■□□□□ 0.54
SUMO3P55854 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
SUMO3P55854 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.43■□□□□ 0.54
SUMO3P55854 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.43■□□□□ 0.54
SUMO3P55854 AC092118.2-201ENST00000613495 667 ntBASIC18.43■□□□□ 0.54
SUMO3P55854 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.43■□□□□ 0.54
SUMO3P55854 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SUMO3P55854 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SUMO3P55854 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SUMO3P55854 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SUMO3P55854 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.43■□□□□ 0.54
SUMO3P55854 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SUMO3P55854 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SUMO3P55854 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SUMO3P55854 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SUMO3P55854 AC073314.1-201ENST00000568729 2216 ntBASIC18.42■□□□□ 0.54
SUMO3P55854 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SUMO3P55854 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SUMO3P55854 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SUMO3P55854 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SUMO3P55854 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms