Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH8P55286 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH8P55286 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH8P55286 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH8P55286 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH8P55286 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.08
CDH8P55286 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.77■■□□□ 1.08
CDH8P55286 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.77■■□□□ 1.08
CDH8P55286 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.77■■□□□ 1.08
CDH8P55286 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH8P55286 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CDH8P55286 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH8P55286 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.76■■□□□ 1.07
CDH8P55286 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDH8P55286 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH8P55286 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDH8P55286 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH8P55286 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH8P55286 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDH8P55286 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CDH8P55286 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.76■■□□□ 1.07
CDH8P55286 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
CDH8P55286 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH8P55286 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CDH8P55286 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH8P55286 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDH8P55286 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDH8P55286 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDH8P55286 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CDH8P55286 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDH8P55286 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CDH8P55286 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH8P55286 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CDH8P55286 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH8P55286 PGM5P4-201ENST00000421970 445 ntBASIC21.75■■□□□ 1.07
CDH8P55286 AC091874.3-201ENST00000512672 1195 ntBASIC21.75■■□□□ 1.07
CDH8P55286 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.75■■□□□ 1.07
CDH8P55286 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.75■■□□□ 1.07
CDH8P55286 AC133041.1-202ENST00000642053 222 ntBASIC21.75■■□□□ 1.07
CDH8P55286 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH8P55286 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH8P55286 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH8P55286 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH8P55286 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH8P55286 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CDH8P55286 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH8P55286 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CDH8P55286 AC073210.2-201ENST00000430369 194 ntBASIC21.74■■□□□ 1.07
CDH8P55286 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.74■■□□□ 1.07
CDH8P55286 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.74■■□□□ 1.07
CDH8P55286 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.74■■□□□ 1.07
CDH8P55286 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH8P55286 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDH8P55286 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH8P55286 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDH8P55286 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDH8P55286 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CDH8P55286 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH8P55286 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDH8P55286 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
CDH8P55286 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDH8P55286 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.73■■□□□ 1.07
CDH8P55286 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH8P55286 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH8P55286 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.73■■□□□ 1.07
CDH8P55286 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.73■■□□□ 1.07
CDH8P55286 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDH8P55286 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.73■■□□□ 1.07
CDH8P55286 MYC-209ENST00000641252 345 ntBASIC21.73■■□□□ 1.07
CDH8P55286 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH8P55286 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH8P55286 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.73■■□□□ 1.07
CDH8P55286 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH8P55286 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH8P55286 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH8P55286 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH8P55286 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.72■■□□□ 1.07
CDH8P55286 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH8P55286 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH8P55286 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH8P55286 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH8P55286 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CDH8P55286 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.72■■□□□ 1.07
CDH8P55286 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.72■■□□□ 1.07
CDH8P55286 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.72■■□□□ 1.07
CDH8P55286 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CDH8P55286 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.72■■□□□ 1.07
CDH8P55286 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH8P55286 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CDH8P55286 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CDH8P55286 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH8P55286 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH8P55286 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
CDH8P55286 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH8P55286 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDH8P55286 AC097658.1-201ENST00000475555 843 ntBASIC21.71■■□□□ 1.07
CDH8P55286 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDH8P55286 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.71■■□□□ 1.07
CDH8P55286 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.71■■□□□ 1.07
CDH8P55286 AC083880.1-201ENST00000608266 535 ntBASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms