Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.32■□□□□ 0.84
ZNF140P52738 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.32■□□□□ 0.84
ZNF140P52738 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF140P52738 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF140P52738 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF140P52738 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.32■□□□□ 0.84
ZNF140P52738 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF140P52738 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.32■□□□□ 0.84
ZNF140P52738 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF140P52738 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
ZNF140P52738 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
ZNF140P52738 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.32■□□□□ 0.84
ZNF140P52738 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF140P52738 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.32■□□□□ 0.84
ZNF140P52738 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF140P52738 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF140P52738 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF140P52738 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF140P52738 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF140P52738 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF140P52738 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF140P52738 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF140P52738 PKD1P6-201ENST00000343738 4769 ntBASIC20.31■□□□□ 0.84
ZNF140P52738 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.31■□□□□ 0.84
ZNF140P52738 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF140P52738 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
ZNF140P52738 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.31■□□□□ 0.84
ZNF140P52738 AL355472.2-201ENST00000422958 438 ntBASIC20.31■□□□□ 0.84
ZNF140P52738 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.31■□□□□ 0.84
ZNF140P52738 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.31■□□□□ 0.84
ZNF140P52738 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.31■□□□□ 0.84
ZNF140P52738 AC105020.6-201ENST00000621523 1217 ntBASIC20.31■□□□□ 0.84
ZNF140P52738 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF140P52738 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF140P52738 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF140P52738 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF140P52738 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
ZNF140P52738 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF140P52738 AL162377.1-201ENST00000618844 1793 ntBASIC20.31■□□□□ 0.84
ZNF140P52738 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF140P52738 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF140P52738 AL512408.1-201ENST00000569378 2000 ntBASIC20.31■□□□□ 0.84
ZNF140P52738 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF140P52738 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.3■□□□□ 0.84
ZNF140P52738 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF140P52738 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
ZNF140P52738 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF140P52738 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF140P52738 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF140P52738 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF140P52738 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.3■□□□□ 0.84
ZNF140P52738 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF140P52738 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ZNF140P52738 KRT18P68-201ENST00000392293 1000 ntBASIC20.3■□□□□ 0.84
ZNF140P52738 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF140P52738 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF140P52738 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.3■□□□□ 0.84
ZNF140P52738 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
ZNF140P52738 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF140P52738 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.29■□□□□ 0.84
ZNF140P52738 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF140P52738 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF140P52738 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF140P52738 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF140P52738 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF140P52738 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF140P52738 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.29■□□□□ 0.84
ZNF140P52738 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF140P52738 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF140P52738 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.29■□□□□ 0.84
ZNF140P52738 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF140P52738 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.29■□□□□ 0.84
ZNF140P52738 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
ZNF140P52738 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.29■□□□□ 0.84
ZNF140P52738 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF140P52738 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF140P52738 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF140P52738 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF140P52738 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF140P52738 AC006970.2-201ENST00000450065 779 ntBASIC20.28■□□□□ 0.84
ZNF140P52738 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.28■□□□□ 0.84
ZNF140P52738 AF201337.1-201ENST00000520239 748 ntBASIC20.28■□□□□ 0.84
ZNF140P52738 AC105036.2-201ENST00000569468 176 ntBASIC20.28■□□□□ 0.84
ZNF140P52738 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.28■□□□□ 0.84
ZNF140P52738 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.28■□□□□ 0.84
ZNF140P52738 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.28■□□□□ 0.84
ZNF140P52738 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
ZNF140P52738 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF140P52738 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.28■□□□□ 0.84
ZNF140P52738 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF140P52738 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF140P52738 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF140P52738 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.28■□□□□ 0.84
ZNF140P52738 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF140P52738 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF140P52738 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.27■□□□□ 0.84
ZNF140P52738 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF140P52738 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF140P52738 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF140P52738 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms