Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
MMP13P45452 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MMP13P45452 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
MMP13P45452 RBM17P2-201ENST00000616397 1405 ntBASIC21.15■□□□□ 0.98
MMP13P45452 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MMP13P45452 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MMP13P45452 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.15■□□□□ 0.98
MMP13P45452 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.15■□□□□ 0.98
MMP13P45452 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
MMP13P45452 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MMP13P45452 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.15■□□□□ 0.98
MMP13P45452 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
MMP13P45452 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MMP13P45452 IKBKGP1-201ENST00000612193 1073 ntBASIC21.15■□□□□ 0.98
MMP13P45452 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MMP13P45452 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MMP13P45452 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.15■□□□□ 0.98
MMP13P45452 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MMP13P45452 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.15■□□□□ 0.98
MMP13P45452 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.15■□□□□ 0.98
MMP13P45452 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MMP13P45452 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
MMP13P45452 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
MMP13P45452 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
MMP13P45452 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
MMP13P45452 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
MMP13P45452 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
MMP13P45452 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.14■□□□□ 0.97
MMP13P45452 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.14■□□□□ 0.97
MMP13P45452 MFSD11-216ENST00000590393 1141 ntBASIC21.14■□□□□ 0.97
MMP13P45452 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
MMP13P45452 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.14■□□□□ 0.97
MMP13P45452 AC243732.1-201ENST00000612648 864 ntBASIC21.14■□□□□ 0.97
MMP13P45452 AC010536.3-201ENST00000620306 533 ntBASIC21.14■□□□□ 0.97
MMP13P45452 AC092437.1-201ENST00000624794 1048 ntBASIC21.14■□□□□ 0.97
MMP13P45452 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MMP13P45452 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.14■□□□□ 0.97
MMP13P45452 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MMP13P45452 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MMP13P45452 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MMP13P45452 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.14■□□□□ 0.97
MMP13P45452 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.14■□□□□ 0.97
MMP13P45452 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
MMP13P45452 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MMP13P45452 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MMP13P45452 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MMP13P45452 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MMP13P45452 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
MMP13P45452 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.13■□□□□ 0.97
MMP13P45452 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.13■□□□□ 0.97
MMP13P45452 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.13■□□□□ 0.97
MMP13P45452 BID-214ENST00000617586 542 ntTSL 5 BASIC21.13■□□□□ 0.97
MMP13P45452 AC020907.5-201ENST00000624372 1936 ntBASIC21.13■□□□□ 0.97
MMP13P45452 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
MMP13P45452 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MMP13P45452 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MMP13P45452 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.13■□□□□ 0.97
MMP13P45452 AC121338.2-201ENST00000622535 1744 ntBASIC21.12■□□□□ 0.97
MMP13P45452 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.12■□□□□ 0.97
MMP13P45452 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
MMP13P45452 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.12■□□□□ 0.97
MMP13P45452 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MMP13P45452 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MMP13P45452 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
MMP13P45452 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.12■□□□□ 0.97
MMP13P45452 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MMP13P45452 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MMP13P45452 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.12■□□□□ 0.97
MMP13P45452 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MMP13P45452 AC011767.1-201ENST00000617410 1153 ntBASIC21.12■□□□□ 0.97
MMP13P45452 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
MMP13P45452 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MMP13P45452 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.12■□□□□ 0.97
MMP13P45452 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.12■□□□□ 0.97
MMP13P45452 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MMP13P45452 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.12■□□□□ 0.97
MMP13P45452 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
MMP13P45452 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.12■□□□□ 0.97
MMP13P45452 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MMP13P45452 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
MMP13P45452 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MMP13P45452 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
MMP13P45452 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MMP13P45452 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
MMP13P45452 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MMP13P45452 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
MMP13P45452 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MMP13P45452 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
MMP13P45452 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
MMP13P45452 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MMP13P45452 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
MMP13P45452 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
MMP13P45452 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.11■□□□□ 0.97
MMP13P45452 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
MMP13P45452 AL137784.2-201ENST00000607332 1000 ntBASIC21.11■□□□□ 0.97
MMP13P45452 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
MMP13P45452 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.11■□□□□ 0.97
MMP13P45452 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
MMP13P45452 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.11■□□□□ 0.97
MMP13P45452 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms