Protein–RNA interactions for Protein: P43004

SLC1A2, Excitatory amino acid transporter 2, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A2P43004 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.31■□□□□ 0.84
SLC1A2P43004 AC137761.2-201ENST00000561729 223 ntBASIC20.31■□□□□ 0.84
SLC1A2P43004 RARRES2P6-201ENST00000567333 442 ntBASIC20.31■□□□□ 0.84
SLC1A2P43004 AC145350.3-201ENST00000569033 163 ntBASIC20.31■□□□□ 0.84
SLC1A2P43004 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SLC1A2P43004 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
SLC1A2P43004 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A2P43004 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SLC1A2P43004 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A2P43004 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A2P43004 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SLC1A2P43004 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A2P43004 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.31■□□□□ 0.84
SLC1A2P43004 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A2P43004 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.31■□□□□ 0.84
SLC1A2P43004 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.31■□□□□ 0.84
SLC1A2P43004 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A2P43004 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A2P43004 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A2P43004 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC1A2P43004 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC1A2P43004 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.3■□□□□ 0.84
SLC1A2P43004 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
SLC1A2P43004 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SLC1A2P43004 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC1A2P43004 SMG8-203ENST00000578922 2178 ntBASIC20.3■□□□□ 0.84
SLC1A2P43004 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
SLC1A2P43004 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC1A2P43004 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.3■□□□□ 0.84
SLC1A2P43004 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SLC1A2P43004 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC1A2P43004 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
SLC1A2P43004 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC1A2P43004 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC1A2P43004 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC1A2P43004 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC1A2P43004 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
SLC1A2P43004 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC1A2P43004 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC1A2P43004 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC1A2P43004 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.3■□□□□ 0.84
SLC1A2P43004 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.3■□□□□ 0.84
SLC1A2P43004 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC1A2P43004 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC1A2P43004 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC1A2P43004 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC1A2P43004 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SLC1A2P43004 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SLC1A2P43004 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.29■□□□□ 0.84
SLC1A2P43004 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC1A2P43004 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.29■□□□□ 0.84
SLC1A2P43004 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
SLC1A2P43004 FAM21FP-204ENST00000608637 956 ntBASIC20.29■□□□□ 0.84
SLC1A2P43004 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC1A2P43004 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC1A2P43004 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SLC1A2P43004 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC1A2P43004 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC1A2P43004 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC1A2P43004 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC1A2P43004 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC1A2P43004 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.28■□□□□ 0.84
SLC1A2P43004 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.28■□□□□ 0.84
SLC1A2P43004 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
SLC1A2P43004 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC1A2P43004 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC1A2P43004 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SLC1A2P43004 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.28■□□□□ 0.84
SLC1A2P43004 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.28■□□□□ 0.84
SLC1A2P43004 KRT18P11-201ENST00000435214 1283 ntBASIC20.28■□□□□ 0.84
SLC1A2P43004 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC1A2P43004 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.28■□□□□ 0.84
SLC1A2P43004 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.28■□□□□ 0.84
SLC1A2P43004 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC1A2P43004 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SLC1A2P43004 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.28■□□□□ 0.84
SLC1A2P43004 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.28■□□□□ 0.84
SLC1A2P43004 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC1A2P43004 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.27■□□□□ 0.84
SLC1A2P43004 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SLC1A2P43004 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.27■□□□□ 0.84
SLC1A2P43004 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC1A2P43004 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.27■□□□□ 0.84
SLC1A2P43004 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC1A2P43004 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.27■□□□□ 0.84
SLC1A2P43004 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC1A2P43004 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.27■□□□□ 0.84
SLC1A2P43004 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.27■□□□□ 0.84
SLC1A2P43004 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.27■□□□□ 0.84
SLC1A2P43004 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.27■□□□□ 0.84
SLC1A2P43004 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.27■□□□□ 0.84
SLC1A2P43004 MFSD11-216ENST00000590393 1141 ntBASIC20.27■□□□□ 0.84
SLC1A2P43004 AL591742.1-201ENST00000604433 565 ntBASIC20.27■□□□□ 0.84
SLC1A2P43004 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
SLC1A2P43004 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC1A2P43004 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SLC1A2P43004 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
SLC1A2P43004 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SLC1A2P43004 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SLC1A2P43004 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms