Protein–RNA interactions for Protein: P40089

LSM5, U6 snRNA-associated Sm-like protein LSm5, yeastyeast

Known RBP Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM5P40089 SEC16YPL085W 6588 nt2.14□□□□□ -2.07
LSM5P40089 TFC3YAL001C 3483 nt2.14□□□□□ -2.07
LSM5P40089 CAT2YML042W 2013 nt2.14□□□□□ -2.07
LSM5P40089 YDR286CYDR286C 345 nt2.14□□□□□ -2.07
LSM5P40089 GCN4YEL009C 846 nt2.14□□□□□ -2.07
LSM5P40089 YEL018C-AYEL018C-A 534 nt2.14□□□□□ -2.07
LSM5P40089 RPL9AYGL147C 576 nt2.14□□□□□ -2.07
LSM5P40089 YML084WYML084W 309 nt2.14□□□□□ -2.07
LSM5P40089 PKR1YMR123W 369 nt2.14□□□□□ -2.07
LSM5P40089 SLM6YBR266C 453 nt2.14□□□□□ -2.07
LSM5P40089 PHR1YOR386W 1698 nt2.14□□□□□ -2.07
LSM5P40089 YHR214C-CYHR214C-C 1437 nt2.14□□□□□ -2.07
LSM5P40089 HOP2YGL033W 657 nt2.13□□□□□ -2.07
LSM5P40089 NCE101YJL205C 162 nt2.13□□□□□ -2.07
LSM5P40089 YLR053CYLR053C 327 nt2.13□□□□□ -2.07
LSM5P40089 SYH1YPL105C 2550 nt2.12□□□□□ -2.07
LSM5P40089 DNF1YER166W 4716 nt2.12□□□□□ -2.07
LSM5P40089 USO1YDL058W 5373 nt2.12□□□□□ -2.07
LSM5P40089 MUD2YKL074C 1584 nt2.12□□□□□ -2.07
LSM5P40089 RPL37BYDR500C 267 nt2.12□□□□□ -2.07
LSM5P40089 YAP3YHL009C 993 nt2.12□□□□□ -2.07
LSM5P40089 RPC10YHR143W-A 213 nt2.12□□□□□ -2.07
LSM5P40089 YKL068W-AYKL068W-A 237 nt2.12□□□□□ -2.07
LSM5P40089 IRC19YLL033W 693 nt2.12□□□□□ -2.07
LSM5P40089 RTC6YPL183W-A 282 nt2.12□□□□□ -2.07
LSM5P40089 LOA1YPR139C 903 nt2.12□□□□□ -2.07
LSM5P40089 SNF5YBR289W 2718 nt2.12□□□□□ -2.07
LSM5P40089 IRC10YOL015W 1761 nt2.12□□□□□ -2.07
LSM5P40089 UTP22YGR090W 3714 nt2.12□□□□□ -2.07
LSM5P40089 MSS11YMR164C 2277 nt2.12□□□□□ -2.07
LSM5P40089 CSF1YLR087C 8877 nt2.12□□□□□ -2.07
LSM5P40089 KOG1YHR186C 4674 nt2.11□□□□□ -2.07
LSM5P40089 MMS22YLR320W 4365 nt2.11□□□□□ -2.07
LSM5P40089 RPI1YIL119C 1224 nt2.11□□□□□ -2.07
LSM5P40089 TEN1YLR010C 483 nt2.11□□□□□ -2.07
LSM5P40089 SIP18YMR175W 240 nt2.11□□□□□ -2.07
LSM5P40089 IRC16YPR038W 360 nt2.11□□□□□ -2.07
LSM5P40089 GPX2YBR244W 489 nt2.11□□□□□ -2.07
LSM5P40089 YCL023CYCL023C 348 nt2.11□□□□□ -2.07
LSM5P40089 CDC27YBL084C 2277 nt2.11□□□□□ -2.07
LSM5P40089 SGD1YLR336C 2700 nt2.11□□□□□ -2.07
LSM5P40089 MNL2YLR057W 2550 nt2.1□□□□□ -2.07
LSM5P40089 MGM1YOR211C 2646 nt2.1□□□□□ -2.07
LSM5P40089 RPL16AYIL133C 600 nt2.1□□□□□ -2.07
LSM5P40089 YJR079WYJR079W 330 nt2.1□□□□□ -2.07
LSM5P40089 SEC22YLR268W 645 nt2.1□□□□□ -2.07
LSM5P40089 PEX17YNL214W 600 nt2.1□□□□□ -2.07
LSM5P40089 YOL013W-BYOL013W-B 291 nt2.1□□□□□ -2.07
LSM5P40089 RPH1YER169W 2391 nt2.1□□□□□ -2.07
LSM5P40089 KAR3YPR141C 2190 nt2.1□□□□□ -2.07
LSM5P40089 ALK2YBL009W 2031 nt2.1□□□□□ -2.07
LSM5P40089 MGA2YIR033W 3342 nt2.09□□□□□ -2.07
LSM5P40089 VMR1YHL035C 4779 nt2.09□□□□□ -2.07
LSM5P40089 VPS52YDR484W 1926 nt2.09□□□□□ -2.07
LSM5P40089 MCD1YDL003W 1701 nt2.09□□□□□ -2.07
LSM5P40089 STH1YIL126W 4080 nt2.09□□□□□ -2.07
LSM5P40089 YDL062WYDL062W 426 nt2.09□□□□□ -2.07
LSM5P40089 MTC7YEL033W 420 nt2.09□□□□□ -2.07
LSM5P40089 LSO2YGR169C-A 279 nt2.09□□□□□ -2.07
LSM5P40089 YJL052C-AYJL052C-A 120 nt2.09□□□□□ -2.07
LSM5P40089 YMR052C-AYMR052C-A 366 nt2.09□□□□□ -2.07
LSM5P40089 MRPL44YMR225C 297 nt2.09□□□□□ -2.07
LSM5P40089 COX7YMR256C 183 nt2.09□□□□□ -2.07
LSM5P40089 GPI15YNL038W 690 nt2.09□□□□□ -2.07
LSM5P40089 SPO22YIL073C 2928 nt2.09□□□□□ -2.08
LSM5P40089 VPS35YJL154C 2835 nt2.09□□□□□ -2.08
LSM5P40089 UBP1YDL122W 2430 nt2.08□□□□□ -2.08
LSM5P40089 MXR1YER042W 555 nt2.08□□□□□ -2.08
LSM5P40089 IES5YER092W 378 nt2.08□□□□□ -2.08
LSM5P40089 YER188C-AYER188C-A 300 nt2.08□□□□□ -2.08
LSM5P40089 BIG1YHR101C 1008 nt2.08□□□□□ -2.08
LSM5P40089 YKR051WYKR051W 1257 nt2.08□□□□□ -2.08
LSM5P40089 YMR324CYMR324C 243 nt2.08□□□□□ -2.08
LSM5P40089 PBI2YNL015W 228 nt2.08□□□□□ -2.08
LSM5P40089 TOR2YKL203C 7425 nt2.08□□□□□ -2.08
LSM5P40089 CHC1YGL206C 4962 nt2.08□□□□□ -2.08
LSM5P40089 PPN1YDR452W 2025 nt2.08□□□□□ -2.08
LSM5P40089 YMR045CYMR045C 5268 nt2.07□□□□□ -2.08
LSM5P40089 YCR102W-AYCR102W-A 198 nt2.07□□□□□ -2.08
LSM5P40089 YDL041WYDL041W 354 nt2.07□□□□□ -2.08
LSM5P40089 BRP1YGL007W 378 nt2.07□□□□□ -2.08
LSM5P40089 YGL069CYGL069C 465 nt2.07□□□□□ -2.08
LSM5P40089 MYO4YAL029C 4416 nt2.07□□□□□ -2.08
LSM5P40089 SMY1YKL079W 1971 nt2.07□□□□□ -2.08
LSM5P40089 SSQ1YLR369W 1974 nt2.07□□□□□ -2.08
LSM5P40089 HCS1YKL017C 2052 nt2.06□□□□□ -2.08
LSM5P40089 PDR8YLR266C 2106 nt2.06□□□□□ -2.08
LSM5P40089 SET2YJL168C 2202 nt2.06□□□□□ -2.08
LSM5P40089 SCH9YHR205W 2475 nt2.06□□□□□ -2.08
LSM5P40089 snR79snR79 84 nt2.06□□□□□ -2.08
LSM5P40089 YAL059C-AYAL059C-A 423 nt2.06□□□□□ -2.08
LSM5P40089 CTK3YML112W 891 nt2.06□□□□□ -2.08
LSM5P40089 NOT5YPR072W 1683 nt2.06□□□□□ -2.08
LSM5P40089 RGA1YOR127W 3024 nt2.05□□□□□ -2.08
LSM5P40089 ELG1YOR144C 2376 nt2.05□□□□□ -2.08
LSM5P40089 YCR087C-AYCR087C-A 462 nt2.05□□□□□ -2.08
LSM5P40089 EMP24YGL200C 612 nt2.05□□□□□ -2.08
LSM5P40089 YGR290WYGR290W 444 nt2.05□□□□□ -2.08
LSM5P40089 YHR052W-AYHR052W-A 195 nt2.05□□□□□ -2.08
LSM5P40089 YHR054W-AYHR054W-A 195 nt2.05□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 21.4 ms