Protein–RNA interactions for Protein: P39956

RPH1, DNA damage-responsive transcriptional repressor RPH1, yeastyeast

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPH1P39956 RPS17BYDR447C 411 nt2.34□□□□□ -2.03
RPH1P39956 PSY1YKL076C 384 nt2.34□□□□□ -2.03
RPH1P39956 RPS1AYLR441C 768 nt2.34□□□□□ -2.03
RPH1P39956 AIM32YML050W 936 nt2.34□□□□□ -2.03
RPH1P39956 APL5YPL195W 2799 nt2.34□□□□□ -2.04
RPH1P39956 ECM5YMR176W 4236 nt2.34□□□□□ -2.04
RPH1P39956 TRS130YMR218C 3309 nt2.34□□□□□ -2.04
RPH1P39956 YOL057WYOL057W 2136 nt2.33□□□□□ -2.04
RPH1P39956 STE11YLR362W 2154 nt2.33□□□□□ -2.04
RPH1P39956 TMA10YLR327C 261 nt2.33□□□□□ -2.04
RPH1P39956 YNL146WYNL146W 303 nt2.33□□□□□ -2.04
RPH1P39956 MRPL50YNR022C 420 nt2.33□□□□□ -2.04
RPH1P39956 DNL4YOR005C 2835 nt2.33□□□□□ -2.04
RPH1P39956 MKT1YNL085W 2493 nt2.33□□□□□ -2.04
RPH1P39956 SVL3YPL032C 2478 nt2.33□□□□□ -2.04
RPH1P39956 YJL181WYJL181W 1836 nt2.33□□□□□ -2.04
RPH1P39956 LEU3YLR451W 2661 nt2.33□□□□□ -2.04
RPH1P39956 TIM11YDR322C-A 291 nt2.32□□□□□ -2.04
RPH1P39956 RPL27BYDR471W 411 nt2.32□□□□□ -2.04
RPH1P39956 ESF2YNR054C 951 nt2.32□□□□□ -2.04
RPH1P39956 YOL159C-AYOL159C-A 273 nt2.32□□□□□ -2.04
RPH1P39956 ATP15YPL271W 189 nt2.32□□□□□ -2.04
RPH1P39956 TRA1YHR099W 11235 nt2.32□□□□□ -2.04
RPH1P39956 SPB1YCL054W 2526 nt2.32□□□□□ -2.04
RPH1P39956 SSY1YDR160W 2559 nt2.32□□□□□ -2.04
RPH1P39956 SPC72YAL047C 1869 nt2.31□□□□□ -2.04
RPH1P39956 YIL058WYIL058W 285 nt2.31□□□□□ -2.04
RPH1P39956 YOR121CYOR121C 306 nt2.31□□□□□ -2.04
RPH1P39956 YIL080WYIL080W 4722 nt2.31□□□□□ -2.04
RPH1P39956 GNT1YOR320C 1476 nt2.31□□□□□ -2.04
RPH1P39956 DIE2YGR227W 1578 nt2.31□□□□□ -2.04
RPH1P39956 RLF2YPR018W 1821 nt2.31□□□□□ -2.04
RPH1P39956 APC2YLR127C 2562 nt2.3□□□□□ -2.04
RPH1P39956 GPI8YDR331W 1236 nt2.3□□□□□ -2.04
RPH1P39956 YGR035CYGR035C 351 nt2.3□□□□□ -2.04
RPH1P39956 RTT102YGR275W 474 nt2.3□□□□□ -2.04
RPH1P39956 tT(UGU)Q1tT(UGU)Q1 76 nt2.3□□□□□ -2.04
RPH1P39956 YML009C-AYML009C-A 327 nt2.3□□□□□ -2.04
RPH1P39956 EGD1YPL037C 474 nt2.3□□□□□ -2.04
RPH1P39956 DAD3YBR233W-A 285 nt2.3□□□□□ -2.04
RPH1P39956 YIL166CYIL166C 1629 nt2.3□□□□□ -2.04
RPH1P39956 YJR098CYJR098C 1971 nt2.3□□□□□ -2.04
RPH1P39956 SAP190YKR028W 3102 nt2.3□□□□□ -2.04
RPH1P39956 GCV2YMR189W 3105 nt2.3□□□□□ -2.04
RPH1P39956 SEC16YPL085W 6588 nt2.3□□□□□ -2.04
RPH1P39956 YSW1YBR148W 1830 nt2.29□□□□□ -2.04
RPH1P39956 YDL240C-AYDL240C-A 138 nt2.29□□□□□ -2.04
RPH1P39956 VTC1YER072W 390 nt2.29□□□□□ -2.04
RPH1P39956 AAD16YFL057C 459 nt2.29□□□□□ -2.04
RPH1P39956 HYR1YIR037W 492 nt2.29□□□□□ -2.04
RPH1P39956 RPL40BYKR094C 387 nt2.29□□□□□ -2.04
RPH1P39956 RNP1YLL046C 750 nt2.29□□□□□ -2.04
RPH1P39956 ICY1YMR195W 384 nt2.29□□□□□ -2.04
RPH1P39956 COQ10YOL008W 624 nt2.29□□□□□ -2.04
RPH1P39956 YBT1YLL048C 4986 nt2.29□□□□□ -2.04
RPH1P39956 ADK1YDR226W 669 nt2.28□□□□□ -2.04
RPH1P39956 YER076W-AYER076W-A 348 nt2.28□□□□□ -2.04
RPH1P39956 YLR154W-EYLR154W-E 204 nt2.28□□□□□ -2.04
RPH1P39956 COX7YMR256C 183 nt2.28□□□□□ -2.04
RPH1P39956 YOR146WYOR146W 306 nt2.28□□□□□ -2.04
RPH1P39956 YSY6YBR162W-A 198 nt2.28□□□□□ -2.04
RPH1P39956 TRM2YKR056W 1920 nt2.28□□□□□ -2.04
RPH1P39956 IRC8YJL051W 2469 nt2.28□□□□□ -2.04
RPH1P39956 SSE1YPL106C 2082 nt2.27□□□□□ -2.05
RPH1P39956 PEX4YGR133W 552 nt2.27□□□□□ -2.05
RPH1P39956 NCE101YJL205C 162 nt2.27□□□□□ -2.05
RPH1P39956 CGI121YML036W 546 nt2.27□□□□□ -2.05
RPH1P39956 YPL225WYPL225W 441 nt2.27□□□□□ -2.05
RPH1P39956 YPR016W-AYPR016W-A 261 nt2.27□□□□□ -2.05
RPH1P39956 TOF1YNL273W 3717 nt2.27□□□□□ -2.05
RPH1P39956 PUF4YGL014W 2667 nt2.26□□□□□ -2.05
RPH1P39956 NUP82YJL061W 2142 nt2.26□□□□□ -2.05
RPH1P39956 YJL016WYJL016W 1686 nt2.26□□□□□ -2.05
RPH1P39956 YDL068WYDL068W 330 nt2.26□□□□□ -2.05
RPH1P39956 AYR1YIL124W 894 nt2.26□□□□□ -2.05
RPH1P39956 RPS22BYLR367W 393 nt2.26□□□□□ -2.05
RPH1P39956 RPL25YOL127W 429 nt2.26□□□□□ -2.05
RPH1P39956 YOR105WYOR105W 327 nt2.26□□□□□ -2.05
RPH1P39956 BRO1YPL084W 2535 nt2.26□□□□□ -2.05
RPH1P39956 SWA2YDR320C 2007 nt2.25□□□□□ -2.05
RPH1P39956 PSK2YOL045W 3306 nt2.25□□□□□ -2.05
RPH1P39956 MRP10YDL045W-A 288 nt2.25□□□□□ -2.05
RPH1P39956 URM1YIL008W 300 nt2.25□□□□□ -2.05
RPH1P39956 YKL165C-AYKL165C-A 234 nt2.25□□□□□ -2.05
RPH1P39956 YAL063C-AYAL063C-A 291 nt2.25□□□□□ -2.05
RPH1P39956 ECM25YJL201W 1800 nt2.25□□□□□ -2.05
RPH1P39956 NPR3YHL023C 3441 nt2.25□□□□□ -2.05
RPH1P39956 SSD1YDR293C 3753 nt2.25□□□□□ -2.05
RPH1P39956 VPS52YDR484W 1926 nt2.25□□□□□ -2.05
RPH1P39956 PUT3YKL015W 2940 nt2.24□□□□□ -2.05
RPH1P39956 COX1Q0045 1605 nt2.24□□□□□ -2.05
RPH1P39956 INP53YOR109W 3324 nt2.24□□□□□ -2.05
RPH1P39956 PSO2YMR137C 1986 nt2.24□□□□□ -2.05
RPH1P39956 TRM7YBR061C 933 nt2.24□□□□□ -2.05
RPH1P39956 TOR1YJR066W 7413 nt2.24□□□□□ -2.05
RPH1P39956 AMS1YGL156W 3252 nt2.24□□□□□ -2.05
RPH1P39956 POM152YMR129W 4014 nt2.23□□□□□ -2.05
RPH1P39956 YRB1YDR002W 606 nt2.23□□□□□ -2.05
RPH1P39956 YER189WYER189W 369 nt2.23□□□□□ -2.05
RPH1P39956 YKL136WYKL136W 399 nt2.23□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 17.9 ms