Protein–RNA interactions for Protein: P39904

VPS52, Vacuolar protein sorting-associated protein 52, yeastyeast

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS52P39904 RAM2YKL019W 951 nt2.29□□□□□ -2.04
VPS52P39904 YLR458WYLR458W 381 nt2.29□□□□□ -2.04
VPS52P39904 YOR192C-CYOR192C-C 237 nt2.29□□□□□ -2.04
VPS52P39904 ATP15YPL271W 189 nt2.29□□□□□ -2.04
VPS52P39904 FIR1YER032W 2631 nt2.28□□□□□ -2.04
VPS52P39904 GCV2YMR189W 3105 nt2.28□□□□□ -2.04
VPS52P39904 NCE101YJL205C 162 nt2.28□□□□□ -2.04
VPS52P39904 MRPL50YNR022C 420 nt2.28□□□□□ -2.04
VPS52P39904 ASG1YIL130W 2895 nt2.28□□□□□ -2.04
VPS52P39904 ORC2YBR060C 1863 nt2.28□□□□□ -2.04
VPS52P39904 DIE2YGR227W 1578 nt2.27□□□□□ -2.05
VPS52P39904 GNT1YOR320C 1476 nt2.27□□□□□ -2.05
VPS52P39904 RLI1YDR091C 1827 nt2.27□□□□□ -2.05
VPS52P39904 YER079C-AYER079C-A 339 nt2.27□□□□□ -2.05
VPS52P39904 AAD16YFL057C 459 nt2.27□□□□□ -2.05
VPS52P39904 CCW14YLR390W-A 717 nt2.27□□□□□ -2.05
VPS52P39904 YLR434CYLR434C 384 nt2.27□□□□□ -2.05
VPS52P39904 UBC7YMR022W 498 nt2.27□□□□□ -2.05
VPS52P39904 FPR1YNL135C 345 nt2.27□□□□□ -2.05
VPS52P39904 VTC3YPL019C 2508 nt2.27□□□□□ -2.05
VPS52P39904 SAK1YER129W 3429 nt2.27□□□□□ -2.05
VPS52P39904 YJL181WYJL181W 1836 nt2.26□□□□□ -2.05
VPS52P39904 SWR1YDR334W 4545 nt2.26□□□□□ -2.05
VPS52P39904 COX7YMR256C 183 nt2.26□□□□□ -2.05
VPS52P39904 KTI11YBL071W-A 249 nt2.26□□□□□ -2.05
VPS52P39904 YOR055WYOR055W 435 nt2.26□□□□□ -2.05
VPS52P39904 ATP3YBR039W 936 nt2.26□□□□□ -2.05
VPS52P39904 KSP1YHR082C 3090 nt2.26□□□□□ -2.05
VPS52P39904 SUL1YBR294W 2580 nt2.25□□□□□ -2.05
VPS52P39904 VPS52YDR484W 1926 nt2.25□□□□□ -2.05
VPS52P39904 YBT1YLL048C 4986 nt2.25□□□□□ -2.05
VPS52P39904 RPL40AYIL148W 387 nt2.25□□□□□ -2.05
VPS52P39904 SEC22YLR268W 645 nt2.25□□□□□ -2.05
VPS52P39904 YPR197CYPR197C 564 nt2.25□□□□□ -2.05
VPS52P39904 ARP8YOR141C 2646 nt2.25□□□□□ -2.05
VPS52P39904 SPF1YEL031W 3648 nt2.25□□□□□ -2.05
VPS52P39904 PHO2YDL106C 1680 nt2.25□□□□□ -2.05
VPS52P39904 YIL080WYIL080W 4722 nt2.25□□□□□ -2.05
VPS52P39904 YPR089WYPR089W 2667 nt2.24□□□□□ -2.05
VPS52P39904 SIR3YLR442C 2937 nt2.24□□□□□ -2.05
VPS52P39904 YDL041WYDL041W 354 nt2.24□□□□□ -2.05
VPS52P39904 AYR1YIL124W 894 nt2.24□□□□□ -2.05
VPS52P39904 PAU14YIL176C 363 nt2.24□□□□□ -2.05
VPS52P39904 PAU1YJL223C 363 nt2.24□□□□□ -2.05
VPS52P39904 RNP1YLL046C 750 nt2.24□□□□□ -2.05
VPS52P39904 YLR031WYLR031W 561 nt2.24□□□□□ -2.05
VPS52P39904 RPS22BYLR367W 393 nt2.24□□□□□ -2.05
VPS52P39904 YOR146WYOR146W 306 nt2.24□□□□□ -2.05
VPS52P39904 EGD1YPL037C 474 nt2.24□□□□□ -2.05
VPS52P39904 COX1Q0045 1605 nt2.24□□□□□ -2.05
VPS52P39904 MSS11YMR164C 2277 nt2.24□□□□□ -2.05
VPS52P39904 TOR1YJR066W 7413 nt2.23□□□□□ -2.05
VPS52P39904 FAR11YNL127W 2862 nt2.23□□□□□ -2.05
VPS52P39904 TMA10YLR327C 261 nt2.23□□□□□ -2.05
VPS52P39904 RPS29AYLR388W 171 nt2.23□□□□□ -2.05
VPS52P39904 RPS1AYLR441C 768 nt2.23□□□□□ -2.05
VPS52P39904 COQ10YOL008W 624 nt2.23□□□□□ -2.05
VPS52P39904 MLH1YMR167W 2310 nt2.23□□□□□ -2.05
VPS52P39904 KRE33YNL132W 3171 nt2.22□□□□□ -2.05
VPS52P39904 SDC25YLL016W 3147 nt2.22□□□□□ -2.05
VPS52P39904 URM1YIL008W 300 nt2.22□□□□□ -2.05
VPS52P39904 YIL156W-BYIL156W-B 222 nt2.22□□□□□ -2.05
VPS52P39904 CRS5YOR031W 210 nt2.22□□□□□ -2.05
VPS52P39904 YOR121CYOR121C 306 nt2.22□□□□□ -2.05
VPS52P39904 IRC10YOL015W 1761 nt2.22□□□□□ -2.05
VPS52P39904 PRP6YBR055C 2700 nt2.22□□□□□ -2.05
VPS52P39904 OSW7YFR039C 1533 nt2.22□□□□□ -2.05
VPS52P39904 MZM1YDR493W 372 nt2.21□□□□□ -2.06
VPS52P39904 YEL057CYEL057C 702 nt2.21□□□□□ -2.06
VPS52P39904 YER137W-AYER137W-A 306 nt2.21□□□□□ -2.06
VPS52P39904 YGL014C-AYGL014C-A 162 nt2.21□□□□□ -2.06
VPS52P39904 SCP160YJL080C 3669 nt2.21□□□□□ -2.06
VPS52P39904 YAL063C-AYAL063C-A 291 nt2.21□□□□□ -2.06
VPS52P39904 YNL010WYNL010W 726 nt2.21□□□□□ -2.06
VPS52P39904 YOL159C-AYOL159C-A 273 nt2.21□□□□□ -2.06
VPS52P39904 TMN3YER113C 2121 nt2.21□□□□□ -2.06
VPS52P39904 YEF3YLR249W 3135 nt2.2□□□□□ -2.06
VPS52P39904 PHO91YNR013C 2685 nt2.2□□□□□ -2.06
VPS52P39904 RPS20YHL015W 366 nt2.2□□□□□ -2.06
VPS52P39904 PSY1YKL076C 384 nt2.2□□□□□ -2.06
VPS52P39904 YLR154W-EYLR154W-E 204 nt2.2□□□□□ -2.06
VPS52P39904 RPL36AYMR194W 303 nt2.2□□□□□ -2.06
VPS52P39904 YBL071CYBL071C 309 nt2.2□□□□□ -2.06
VPS52P39904 ROX1YPR065W 1107 nt2.2□□□□□ -2.06
VPS52P39904 UBP15YMR304W 3693 nt2.2□□□□□ -2.06
VPS52P39904 STH1YIL126W 4080 nt2.2□□□□□ -2.06
VPS52P39904 STE11YLR362W 2154 nt2.2□□□□□ -2.06
VPS52P39904 snR79snR79 84 nt2.19□□□□□ -2.06
VPS52P39904 YJL202CYJL202C 348 nt2.19□□□□□ -2.06
VPS52P39904 SVL3YPL032C 2478 nt2.19□□□□□ -2.06
VPS52P39904 RGA2YDR379W 3030 nt2.19□□□□□ -2.06
VPS52P39904 SCD5YOR329C 2619 nt2.19□□□□□ -2.06
VPS52P39904 BNI1YNL271C 5862 nt2.19□□□□□ -2.06
VPS52P39904 MSL5YLR116W 1431 nt2.18□□□□□ -2.06
VPS52P39904 UBP11YKR098C 2154 nt2.18□□□□□ -2.06
VPS52P39904 PTC5YOR090C 1719 nt2.18□□□□□ -2.06
VPS52P39904 YDL025W-AYDL025W-A 105 nt2.18□□□□□ -2.06
VPS52P39904 YGR035CYGR035C 351 nt2.18□□□□□ -2.06
VPS52P39904 RTT102YGR275W 474 nt2.18□□□□□ -2.06
VPS52P39904 YJR011CYJR011C 786 nt2.18□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 67.7 ms