Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTPN7P35236 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
PTPN7P35236 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTPN7P35236 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
PTPN7P35236 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.07■□□□□ 0.96
PTPN7P35236 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.06■□□□□ 0.96
PTPN7P35236 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.06■□□□□ 0.96
PTPN7P35236 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.06■□□□□ 0.96
PTPN7P35236 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PTPN7P35236 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTPN7P35236 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTPN7P35236 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PTPN7P35236 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PTPN7P35236 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PTPN7P35236 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.06■□□□□ 0.96
PTPN7P35236 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
PTPN7P35236 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.06■□□□□ 0.96
PTPN7P35236 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.06■□□□□ 0.96
PTPN7P35236 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTPN7P35236 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.06■□□□□ 0.96
PTPN7P35236 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTPN7P35236 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTPN7P35236 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTPN7P35236 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PTPN7P35236 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.06■□□□□ 0.96
PTPN7P35236 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
PTPN7P35236 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTPN7P35236 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PTPN7P35236 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PTPN7P35236 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.05■□□□□ 0.96
PTPN7P35236 AC112907.3-201ENST00000577781 2400 ntBASIC21.05■□□□□ 0.96
PTPN7P35236 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
PTPN7P35236 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.05■□□□□ 0.96
PTPN7P35236 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
PTPN7P35236 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTPN7P35236 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.05■□□□□ 0.96
PTPN7P35236 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTPN7P35236 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTPN7P35236 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PTPN7P35236 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTPN7P35236 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTPN7P35236 SMG8-203ENST00000578922 2178 ntBASIC21.04■□□□□ 0.96
PTPN7P35236 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTPN7P35236 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.04■□□□□ 0.96
PTPN7P35236 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTPN7P35236 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.04■□□□□ 0.96
PTPN7P35236 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PTPN7P35236 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.04■□□□□ 0.96
PTPN7P35236 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.04■□□□□ 0.96
PTPN7P35236 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.04■□□□□ 0.96
PTPN7P35236 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTPN7P35236 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PTPN7P35236 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTPN7P35236 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTPN7P35236 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.04■□□□□ 0.96
PTPN7P35236 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.04■□□□□ 0.96
PTPN7P35236 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PTPN7P35236 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.04■□□□□ 0.96
PTPN7P35236 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PTPN7P35236 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
PTPN7P35236 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTPN7P35236 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
PTPN7P35236 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PTPN7P35236 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PTPN7P35236 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.03■□□□□ 0.96
PTPN7P35236 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
PTPN7P35236 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTPN7P35236 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PTPN7P35236 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTPN7P35236 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.03■□□□□ 0.96
PTPN7P35236 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.03■□□□□ 0.96
PTPN7P35236 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.03■□□□□ 0.96
PTPN7P35236 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PTPN7P35236 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
PTPN7P35236 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.03■□□□□ 0.96
PTPN7P35236 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
PTPN7P35236 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
PTPN7P35236 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PTPN7P35236 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTPN7P35236 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.03■□□□□ 0.96
PTPN7P35236 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTPN7P35236 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.03■□□□□ 0.96
PTPN7P35236 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.03■□□□□ 0.96
PTPN7P35236 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTPN7P35236 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTPN7P35236 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.02■□□□□ 0.96
PTPN7P35236 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTPN7P35236 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTPN7P35236 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTPN7P35236 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.02■□□□□ 0.96
PTPN7P35236 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.02■□□□□ 0.96
PTPN7P35236 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.02■□□□□ 0.96
PTPN7P35236 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTPN7P35236 TERF1P5-201ENST00000477545 1207 ntBASIC21.02■□□□□ 0.96
PTPN7P35236 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.02■□□□□ 0.96
PTPN7P35236 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.02■□□□□ 0.96
PTPN7P35236 AL162412.1-201ENST00000567129 965 ntBASIC21.02■□□□□ 0.96
PTPN7P35236 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.02■□□□□ 0.96
PTPN7P35236 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.02■□□□□ 0.96
PTPN7P35236 NTF6G-201ENST00000591094 616 ntBASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms