Protein–RNA interactions for Protein: P33202

UFD4, Ubiquitin fusion degradation protein 4, yeastyeast

Predictions only

Length 1,483 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD4P33202 SAY1YGR263C 1275 nt0.36□□□□□ -2.35
UFD4P33202 CTL1YMR180C 963 nt0.36□□□□□ -2.35
UFD4P33202 APC5YOR249C 2058 nt0.36□□□□□ -2.35
UFD4P33202 SEC22YLR268W 645 nt0.35□□□□□ -2.35
UFD4P33202 CMC2YBL059C-A 330 nt0.35□□□□□ -2.35
UFD4P33202 CCL1YPR025C 1182 nt0.35□□□□□ -2.35
UFD4P33202 DGR2YKL121W 2559 nt0.35□□□□□ -2.35
UFD4P33202 YDR042CYDR042C 603 nt0.35□□□□□ -2.35
UFD4P33202 IRC19YLL033W 693 nt0.35□□□□□ -2.35
UFD4P33202 COF1YLL050C 432 nt0.35□□□□□ -2.35
UFD4P33202 NGL1YOL042W 1092 nt0.35□□□□□ -2.35
UFD4P33202 ACA1YER045C 1470 nt0.34□□□□□ -2.35
UFD4P33202 YDR261W-AYDR261W-A 1317 nt0.34□□□□□ -2.35
UFD4P33202 RPL38YLR325C 237 nt0.34□□□□□ -2.36
UFD4P33202 YNL010WYNL010W 726 nt0.34□□□□□ -2.36
UFD4P33202 YNR034W-AYNR034W-A 297 nt0.34□□□□□ -2.36
UFD4P33202 ICS2YBR157C 768 nt0.34□□□□□ -2.36
UFD4P33202 MRP49YKL167C 414 nt0.33□□□□□ -2.36
UFD4P33202 GRX7YBR014C 612 nt0.33□□□□□ -2.36
UFD4P33202 snR45snR45 172 nt0.33□□□□□ -2.36
UFD4P33202 NGG1YDR176W 2109 nt0.33□□□□□ -2.36
UFD4P33202 MER1YNL210W 813 nt0.32□□□□□ -2.36
UFD4P33202 IRC23YOR044W 474 nt0.32□□□□□ -2.36
UFD4P33202 SRL4YPL033C 846 nt0.32□□□□□ -2.36
UFD4P33202 YIL012WYIL012W 342 nt0.31□□□□□ -2.36
UFD4P33202 NUP188YML103C 4968 nt0.31□□□□□ -2.36
UFD4P33202 TAD1YGL243W 1203 nt0.3□□□□□ -2.36
UFD4P33202 SPC42YKL042W 1092 nt0.3□□□□□ -2.36
UFD4P33202 HHT1YBR010W 411 nt0.3□□□□□ -2.36
UFD4P33202 YPR014CYPR014C 330 nt0.3□□□□□ -2.36
UFD4P33202 RRP15YPR143W 753 nt0.3□□□□□ -2.36
UFD4P33202 YGR250CYGR250C 2346 nt0.29□□□□□ -2.36
UFD4P33202 YIL030W-AYIL030W-A 339 nt0.29□□□□□ -2.36
UFD4P33202 UAF30YOR295W 687 nt0.29□□□□□ -2.36
UFD4P33202 YFL012W-AYFL012W-A 375 nt0.29□□□□□ -2.36
UFD4P33202 YLL020CYLL020C 306 nt0.29□□□□□ -2.36
UFD4P33202 RPL6BYLR448W 531 nt0.29□□□□□ -2.36
UFD4P33202 CYB5YNL111C 363 nt0.29□□□□□ -2.36
UFD4P33202 NNF2YGR089W 2811 nt0.28□□□□□ -2.36
UFD4P33202 UTP10YJL109C 5310 nt0.28□□□□□ -2.36
UFD4P33202 YCR015CYCR015C 954 nt0.28□□□□□ -2.37
UFD4P33202 YDR320W-BYDR320W-B 138 nt0.28□□□□□ -2.37
UFD4P33202 YFR056CYFR056C 369 nt0.28□□□□□ -2.37
UFD4P33202 YGL118CYGL118C 438 nt0.28□□□□□ -2.37
UFD4P33202 YHL009W-AYHL009W-A 1242 nt0.28□□□□□ -2.37
UFD4P33202 YNL144W-AYNL144W-A 84 nt0.28□□□□□ -2.37
UFD4P33202 SMY1YKL079W 1971 nt0.27□□□□□ -2.37
UFD4P33202 YDR286CYDR286C 345 nt0.27□□□□□ -2.37
UFD4P33202 SFM1YOR021C 642 nt0.27□□□□□ -2.37
UFD4P33202 DSE2YHR143W 978 nt0.26□□□□□ -2.37
UFD4P33202 YLR290CYLR290C 834 nt0.26□□□□□ -2.37
UFD4P33202 GMC2YLR445W 567 nt0.26□□□□□ -2.37
UFD4P33202 YLL007CYLL007C 1998 nt0.26□□□□□ -2.37
UFD4P33202 YGR064WYGR064W 369 nt0.25□□□□□ -2.37
UFD4P33202 FYV6YNL133C 522 nt0.25□□□□□ -2.37
UFD4P33202 MZM1YDR493W 372 nt0.24□□□□□ -2.37
UFD4P33202 SMB1YER029C 591 nt0.24□□□□□ -2.37
UFD4P33202 YGL138CYGL138C 1038 nt0.24□□□□□ -2.37
UFD4P33202 EDC1YGL222C 528 nt0.24□□□□□ -2.37
UFD4P33202 SWT1YOR166C 1377 nt0.24□□□□□ -2.37
UFD4P33202 CDC5YMR001C 2118 nt0.24□□□□□ -2.37
UFD4P33202 RSM27YGR215W 333 nt0.23□□□□□ -2.37
UFD4P33202 NBP1YLR457C 960 nt0.23□□□□□ -2.37
UFD4P33202 snR13snR13 124 nt0.23□□□□□ -2.37
UFD4P33202 SGO1YOR073W 1773 nt0.23□□□□□ -2.37
UFD4P33202 YEL009C-AYEL009C-A 408 nt0.22□□□□□ -2.37
UFD4P33202 YAR053WYAR053W 297 nt0.22□□□□□ -2.37
UFD4P33202 YMR178WYMR178W 825 nt0.22□□□□□ -2.37
UFD4P33202 LSM7YNL147W 348 nt0.22□□□□□ -2.37
UFD4P33202 YOR161W-BYOR161W-B 261 nt0.22□□□□□ -2.37
UFD4P33202 PEX34YCL056C 435 nt0.22□□□□□ -2.37
UFD4P33202 STB6YKL072W 2301 nt0.22□□□□□ -2.37
UFD4P33202 YER088C-AYER088C-A 324 nt0.22□□□□□ -2.37
UFD4P33202 MUB1YMR100W 1863 nt0.21□□□□□ -2.38
UFD4P33202 JJJ2YJL162C 1752 nt0.21□□□□□ -2.38
UFD4P33202 YJL211CYJL211C 444 nt0.21□□□□□ -2.38
UFD4P33202 YOR376WYOR376W 369 nt0.21□□□□□ -2.38
UFD4P33202 SLU7YDR088C 1149 nt0.2□□□□□ -2.38
UFD4P33202 TSA2YDR453C 591 nt0.2□□□□□ -2.38
UFD4P33202 ADF1YCL058W-A 342 nt0.2□□□□□ -2.38
UFD4P33202 AIM9YER080W 1884 nt0.19□□□□□ -2.38
UFD4P33202 DIG2YDR480W 972 nt0.19□□□□□ -2.38
UFD4P33202 ULI1YFR026C 510 nt0.19□□□□□ -2.38
UFD4P33202 ERV14YGL054C 417 nt0.19□□□□□ -2.38
UFD4P33202 TAN1YGL232W 870 nt0.19□□□□□ -2.38
UFD4P33202 VMA7YGR020C 357 nt0.19□□□□□ -2.38
UFD4P33202 YBL100W-BYBL100W-B 5313 nt0.19□□□□□ -2.38
UFD4P33202 DUO1YGL061C 744 nt0.18□□□□□ -2.38
UFD4P33202 REX3YLR107W 1215 nt0.18□□□□□ -2.38
UFD4P33202 YET2YMR040W 483 nt0.18□□□□□ -2.38
UFD4P33202 RRG1YDR065W 1098 nt0.17□□□□□ -2.38
UFD4P33202 KEG1YFR042W 603 nt0.17□□□□□ -2.38
UFD4P33202 YNL226WYNL226W 411 nt0.17□□□□□ -2.38
UFD4P33202 YOR203WYOR203W 354 nt0.17□□□□□ -2.38
UFD4P33202 ENV11YGR071C 2583 nt0.17□□□□□ -2.38
UFD4P33202 SEC5YDR166C 2916 nt0.17□□□□□ -2.38
UFD4P33202 NUP120YKL057C 3114 nt0.17□□□□□ -2.38
UFD4P33202 GLG1YKR058W 1851 nt0.16□□□□□ -2.38
UFD4P33202 RTR1YER139C 681 nt0.16□□□□□ -2.38
UFD4P33202 FAR7YFR008W 666 nt0.16□□□□□ -2.38
Retrieved 100 of 7,029 protein–RNA pairs in 177 ms