Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GDF1P27539 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.49■□□□□ 0.55
GDF1P27539 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GDF1P27539 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
GDF1P27539 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GDF1P27539 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GDF1P27539 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.49■□□□□ 0.55
GDF1P27539 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
GDF1P27539 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.49■□□□□ 0.55
GDF1P27539 POU5F1P3-201ENST00000428824 1078 ntBASIC18.49■□□□□ 0.55
GDF1P27539 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.49■□□□□ 0.55
GDF1P27539 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.49■□□□□ 0.55
GDF1P27539 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.49■□□□□ 0.55
GDF1P27539 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.49■□□□□ 0.55
GDF1P27539 AC060766.5-201ENST00000590539 871 ntBASIC18.49■□□□□ 0.55
GDF1P27539 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
GDF1P27539 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.49■□□□□ 0.55
GDF1P27539 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GDF1P27539 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GDF1P27539 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
GDF1P27539 AC027702.1-201ENST00000563810 1770 ntBASIC18.49■□□□□ 0.55
GDF1P27539 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GDF1P27539 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GDF1P27539 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GDF1P27539 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
GDF1P27539 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
GDF1P27539 AC026310.3-201ENST00000625186 2373 ntBASIC18.48■□□□□ 0.55
GDF1P27539 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.48■□□□□ 0.55
GDF1P27539 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
GDF1P27539 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
GDF1P27539 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
GDF1P27539 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.48■□□□□ 0.55
GDF1P27539 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GDF1P27539 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
GDF1P27539 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
GDF1P27539 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GDF1P27539 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.48■□□□□ 0.55
GDF1P27539 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.48■□□□□ 0.55
GDF1P27539 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.48■□□□□ 0.55
GDF1P27539 C2orf69P4-201ENST00000565394 541 ntBASIC18.48■□□□□ 0.55
GDF1P27539 TMEM191A-211ENST00000637163 1067 ntBASIC18.48■□□□□ 0.55
GDF1P27539 HLA-B-256ENST00000639848 1089 ntBASIC18.48■□□□□ 0.55
GDF1P27539 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
GDF1P27539 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
GDF1P27539 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GDF1P27539 AC092368.3-202ENST00000574180 1591 ntBASIC18.47■□□□□ 0.55
GDF1P27539 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
GDF1P27539 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
GDF1P27539 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
GDF1P27539 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.47■□□□□ 0.55
GDF1P27539 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GDF1P27539 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.47■□□□□ 0.55
GDF1P27539 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
GDF1P27539 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.47■□□□□ 0.55
GDF1P27539 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
GDF1P27539 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
GDF1P27539 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
GDF1P27539 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GDF1P27539 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
GDF1P27539 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.47■□□□□ 0.55
GDF1P27539 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
GDF1P27539 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GDF1P27539 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GDF1P27539 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GDF1P27539 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
GDF1P27539 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
GDF1P27539 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GDF1P27539 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GDF1P27539 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
GDF1P27539 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GDF1P27539 ESRRAP1-201ENST00000400596 1257 ntBASIC18.46■□□□□ 0.55
GDF1P27539 UNC93B5-201ENST00000530315 699 ntBASIC18.46■□□□□ 0.55
GDF1P27539 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
GDF1P27539 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GDF1P27539 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GDF1P27539 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
GDF1P27539 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.46■□□□□ 0.55
GDF1P27539 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GDF1P27539 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.46■□□□□ 0.55
GDF1P27539 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GDF1P27539 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GDF1P27539 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
GDF1P27539 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
GDF1P27539 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GDF1P27539 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GDF1P27539 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GDF1P27539 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GDF1P27539 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GDF1P27539 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GDF1P27539 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GDF1P27539 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
GDF1P27539 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GDF1P27539 PNMA6B-201ENST00000538162 1200 ntBASIC18.45■□□□□ 0.54
GDF1P27539 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.45■□□□□ 0.54
GDF1P27539 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GDF1P27539 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GDF1P27539 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
GDF1P27539 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GDF1P27539 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
GDF1P27539 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms