Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
MMP8P22894 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
MMP8P22894 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
MMP8P22894 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MMP8P22894 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
MMP8P22894 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.47■■□□□ 1.03
MMP8P22894 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
MMP8P22894 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
MMP8P22894 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
MMP8P22894 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
MMP8P22894 PGM5P4-201ENST00000421970 445 ntBASIC21.47■■□□□ 1.03
MMP8P22894 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.47■■□□□ 1.03
MMP8P22894 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.47■■□□□ 1.03
MMP8P22894 AL356652.1-201ENST00000615962 565 ntBASIC21.47■■□□□ 1.03
MMP8P22894 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.47■■□□□ 1.03
MMP8P22894 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.47■■□□□ 1.03
MMP8P22894 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MMP8P22894 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
MMP8P22894 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
MMP8P22894 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.47■■□□□ 1.03
MMP8P22894 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
MMP8P22894 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
MMP8P22894 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.46■■□□□ 1.03
MMP8P22894 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.46■■□□□ 1.03
MMP8P22894 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MMP8P22894 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
MMP8P22894 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
MMP8P22894 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MMP8P22894 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
MMP8P22894 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
MMP8P22894 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.46■■□□□ 1.03
MMP8P22894 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.46■■□□□ 1.03
MMP8P22894 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
MMP8P22894 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.46■■□□□ 1.03
MMP8P22894 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MMP8P22894 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MMP8P22894 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.46■■□□□ 1.03
MMP8P22894 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.46■■□□□ 1.03
MMP8P22894 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MMP8P22894 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
MMP8P22894 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
MMP8P22894 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.46■■□□□ 1.03
MMP8P22894 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MMP8P22894 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.45■■□□□ 1.02
MMP8P22894 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MMP8P22894 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MMP8P22894 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MMP8P22894 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
MMP8P22894 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
MMP8P22894 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.45■■□□□ 1.02
MMP8P22894 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.45■■□□□ 1.02
MMP8P22894 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.45■■□□□ 1.02
MMP8P22894 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MMP8P22894 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
MMP8P22894 AC080038.1-201ENST00000611274 1154 ntBASIC21.45■■□□□ 1.02
MMP8P22894 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MMP8P22894 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MMP8P22894 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.45■■□□□ 1.02
MMP8P22894 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MMP8P22894 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
MMP8P22894 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.44■■□□□ 1.02
MMP8P22894 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
MMP8P22894 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
MMP8P22894 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MMP8P22894 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MMP8P22894 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MMP8P22894 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.44■■□□□ 1.02
MMP8P22894 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
MMP8P22894 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MMP8P22894 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.44■■□□□ 1.02
MMP8P22894 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MMP8P22894 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MMP8P22894 MCRIP2P1-201ENST00000394346 511 ntBASIC21.44■■□□□ 1.02
MMP8P22894 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MMP8P22894 AC069236.1-201ENST00000604339 616 ntBASIC21.44■■□□□ 1.02
MMP8P22894 AL137784.2-201ENST00000607332 1000 ntBASIC21.44■■□□□ 1.02
MMP8P22894 AC073111.5-205ENST00000641717 521 ntBASIC21.44■■□□□ 1.02
MMP8P22894 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.44■■□□□ 1.02
MMP8P22894 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
MMP8P22894 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MMP8P22894 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.44■■□□□ 1.02
MMP8P22894 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.43■■□□□ 1.02
MMP8P22894 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
MMP8P22894 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
MMP8P22894 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MMP8P22894 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
MMP8P22894 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MMP8P22894 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
MMP8P22894 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.43■■□□□ 1.02
MMP8P22894 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.43■■□□□ 1.02
MMP8P22894 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MMP8P22894 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
MMP8P22894 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.43■■□□□ 1.02
MMP8P22894 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MMP8P22894 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.43■■□□□ 1.02
MMP8P22894 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
MMP8P22894 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MMP8P22894 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.43■■□□□ 1.02
MMP8P22894 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
MMP8P22894 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms