Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
KRT4P19013 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
KRT4P19013 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT4P19013 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT4P19013 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT4P19013 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
KRT4P19013 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.39■□□□□ 0.86
KRT4P19013 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
KRT4P19013 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
KRT4P19013 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
KRT4P19013 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.39■□□□□ 0.86
KRT4P19013 AC018445.3-201ENST00000624177 1945 ntBASIC20.39■□□□□ 0.86
KRT4P19013 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
KRT4P19013 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
KRT4P19013 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT4P19013 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
KRT4P19013 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.39■□□□□ 0.85
KRT4P19013 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.39■□□□□ 0.85
KRT4P19013 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT4P19013 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT4P19013 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT4P19013 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
KRT4P19013 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT4P19013 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT4P19013 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT4P19013 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.39■□□□□ 0.85
KRT4P19013 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.39■□□□□ 0.85
KRT4P19013 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.38■□□□□ 0.85
KRT4P19013 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRT4P19013 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRT4P19013 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRT4P19013 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
KRT4P19013 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.38■□□□□ 0.85
KRT4P19013 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.38■□□□□ 0.85
KRT4P19013 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.38■□□□□ 0.85
KRT4P19013 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KRT4P19013 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRT4P19013 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
KRT4P19013 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KRT4P19013 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KRT4P19013 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRT4P19013 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.38■□□□□ 0.85
KRT4P19013 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.38■□□□□ 0.85
KRT4P19013 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.38■□□□□ 0.85
KRT4P19013 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.38■□□□□ 0.85
KRT4P19013 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.38■□□□□ 0.85
KRT4P19013 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
KRT4P19013 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
KRT4P19013 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KRT4P19013 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRT4P19013 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.38■□□□□ 0.85
KRT4P19013 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
KRT4P19013 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRT4P19013 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KRT4P19013 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
KRT4P19013 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.37■□□□□ 0.85
KRT4P19013 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT4P19013 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT4P19013 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT4P19013 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT4P19013 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT4P19013 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT4P19013 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.37■□□□□ 0.85
KRT4P19013 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.37■□□□□ 0.85
KRT4P19013 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT4P19013 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.37■□□□□ 0.85
KRT4P19013 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
KRT4P19013 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.37■□□□□ 0.85
KRT4P19013 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.37■□□□□ 0.85
KRT4P19013 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
KRT4P19013 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.37■□□□□ 0.85
KRT4P19013 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.37■□□□□ 0.85
KRT4P19013 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.37■□□□□ 0.85
KRT4P19013 RARRES2P11-201ENST00000635158 484 ntBASIC20.37■□□□□ 0.85
KRT4P19013 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
KRT4P19013 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
KRT4P19013 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT4P19013 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
KRT4P19013 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT4P19013 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT4P19013 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT4P19013 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.37■□□□□ 0.85
KRT4P19013 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT4P19013 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT4P19013 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.36■□□□□ 0.85
KRT4P19013 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.36■□□□□ 0.85
KRT4P19013 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT4P19013 AC098818.2-201ENST00000564925 2320 ntBASIC20.36■□□□□ 0.85
KRT4P19013 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.36■□□□□ 0.85
KRT4P19013 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT4P19013 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT4P19013 MIR572-201ENST00000384983 95 ntBASIC20.36■□□□□ 0.85
KRT4P19013 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.36■□□□□ 0.85
KRT4P19013 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
KRT4P19013 POU5F1P4-201ENST00000413175 1085 ntBASIC20.36■□□□□ 0.85
KRT4P19013 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
KRT4P19013 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.36■□□□□ 0.85
KRT4P19013 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
KRT4P19013 AC027682.1-201ENST00000562846 899 ntBASIC20.36■□□□□ 0.85
KRT4P19013 AC008175.2-201ENST00000612840 297 ntBASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms