Protein–RNA interactions for Protein: P0C2J3

TY2B-LR1, Transposon Ty2-LR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,770 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2B-LR1P0C2J3 ABM1YJR108W 372 nt0.38□□□□□ -2.35
TY2B-LR1P0C2J3 HYR1YIR037W 492 nt0.37□□□□□ -2.35
TY2B-LR1P0C2J3 YLL007CYLL007C 1998 nt0.37□□□□□ -2.35
TY2B-LR1P0C2J3 YLL054CYLL054C 2532 nt0.37□□□□□ -2.35
TY2B-LR1P0C2J3 MVP1YMR004W 1536 nt0.37□□□□□ -2.35
TY2B-LR1P0C2J3 CMC2YBL059C-A 330 nt0.36□□□□□ -2.35
TY2B-LR1P0C2J3 MRPL40YPL173W 894 nt0.36□□□□□ -2.35
TY2B-LR1P0C2J3 snR191snR191 274 nt0.36□□□□□ -2.35
TY2B-LR1P0C2J3 YGR064WYGR064W 369 nt0.35□□□□□ -2.35
TY2B-LR1P0C2J3 YJL026C-AYJL026C-A 222 nt0.35□□□□□ -2.35
TY2B-LR1P0C2J3 YDR248CYDR248C 582 nt0.34□□□□□ -2.35
TY2B-LR1P0C2J3 RPL38YLR325C 237 nt0.34□□□□□ -2.35
TY2B-LR1P0C2J3 SRL4YPL033C 846 nt0.34□□□□□ -2.35
TY2B-LR1P0C2J3 SEC22YLR268W 645 nt0.34□□□□□ -2.36
TY2B-LR1P0C2J3 YDR042CYDR042C 603 nt0.33□□□□□ -2.36
TY2B-LR1P0C2J3 SMB1YER029C 591 nt0.33□□□□□ -2.36
TY2B-LR1P0C2J3 RPL6BYLR448W 531 nt0.33□□□□□ -2.36
TY2B-LR1P0C2J3 JJJ2YJL162C 1752 nt0.33□□□□□ -2.36
TY2B-LR1P0C2J3 YFR056CYFR056C 369 nt0.32□□□□□ -2.36
TY2B-LR1P0C2J3 ERV14YGL054C 417 nt0.32□□□□□ -2.36
TY2B-LR1P0C2J3 RPL9AYGL147C 576 nt0.32□□□□□ -2.36
TY2B-LR1P0C2J3 YJL211CYJL211C 444 nt0.32□□□□□ -2.36
TY2B-LR1P0C2J3 YLR290CYLR290C 834 nt0.32□□□□□ -2.36
TY2B-LR1P0C2J3 YGR250CYGR250C 2346 nt0.32□□□□□ -2.36
TY2B-LR1P0C2J3 SPC42YKL042W 1092 nt0.32□□□□□ -2.36
TY2B-LR1P0C2J3 YOR203WYOR203W 354 nt0.32□□□□□ -2.36
TY2B-LR1P0C2J3 ICS2YBR157C 768 nt0.32□□□□□ -2.36
TY2B-LR1P0C2J3 URB1YKL014C 5295 nt0.31□□□□□ -2.36
TY2B-LR1P0C2J3 YBR201C-AYBR201C-A 204 nt0.31□□□□□ -2.36
TY2B-LR1P0C2J3 RIM20YOR275C 1986 nt0.31□□□□□ -2.36
TY2B-LR1P0C2J3 MUB1YMR100W 1863 nt0.3□□□□□ -2.36
TY2B-LR1P0C2J3 YCR015CYCR015C 954 nt0.3□□□□□ -2.36
TY2B-LR1P0C2J3 CYB5YNL111C 363 nt0.3□□□□□ -2.36
TY2B-LR1P0C2J3 LSM7YNL147W 348 nt0.3□□□□□ -2.36
TY2B-LR1P0C2J3 MER1YNL210W 813 nt0.3□□□□□ -2.36
TY2B-LR1P0C2J3 YNR068CYNR068C 819 nt0.3□□□□□ -2.36
TY2B-LR1P0C2J3 YDR261W-AYDR261W-A 1317 nt0.3□□□□□ -2.36
TY2B-LR1P0C2J3 YCR102W-AYCR102W-A 198 nt0.29□□□□□ -2.36
TY2B-LR1P0C2J3 YEL009C-AYEL009C-A 408 nt0.29□□□□□ -2.36
TY2B-LR1P0C2J3 HOP2YGL033W 657 nt0.29□□□□□ -2.36
TY2B-LR1P0C2J3 YGL118CYGL118C 438 nt0.29□□□□□ -2.36
TY2B-LR1P0C2J3 YHL009W-AYHL009W-A 1242 nt0.29□□□□□ -2.36
TY2B-LR1P0C2J3 DSE2YHR143W 978 nt0.29□□□□□ -2.36
TY2B-LR1P0C2J3 SRP21YKL122C 504 nt0.29□□□□□ -2.36
TY2B-LR1P0C2J3 YET2YMR040W 483 nt0.29□□□□□ -2.36
TY2B-LR1P0C2J3 YMR178WYMR178W 825 nt0.29□□□□□ -2.36
TY2B-LR1P0C2J3 NGG1YDR176W 2109 nt0.28□□□□□ -2.36
TY2B-LR1P0C2J3 UAF30YOR295W 687 nt0.28□□□□□ -2.36
TY2B-LR1P0C2J3 SMY1YKL079W 1971 nt0.28□□□□□ -2.36
TY2B-LR1P0C2J3 MEI4YER044C-A 1227 nt0.27□□□□□ -2.37
TY2B-LR1P0C2J3 COF1YLL050C 432 nt0.27□□□□□ -2.37
TY2B-LR1P0C2J3 YAR053WYAR053W 297 nt0.27□□□□□ -2.37
TY2B-LR1P0C2J3 SAY1YGR263C 1275 nt0.27□□□□□ -2.37
TY2B-LR1P0C2J3 ESP1YGR098C 4893 nt0.26□□□□□ -2.37
TY2B-LR1P0C2J3 SLU7YDR088C 1149 nt0.26□□□□□ -2.37
TY2B-LR1P0C2J3 YFR010W-AYFR010W-A 189 nt0.26□□□□□ -2.37
TY2B-LR1P0C2J3 YHR022CYHR022C 771 nt0.26□□□□□ -2.37
TY2B-LR1P0C2J3 NUP188YML103C 4968 nt0.26□□□□□ -2.37
TY2B-LR1P0C2J3 SLY1YDR189W 2001 nt0.25□□□□□ -2.37
TY2B-LR1P0C2J3 RMD5YDR255C 1266 nt0.25□□□□□ -2.37
TY2B-LR1P0C2J3 YDR286CYDR286C 345 nt0.25□□□□□ -2.37
TY2B-LR1P0C2J3 IRC14YOR135C 342 nt0.25□□□□□ -2.37
TY2B-LR1P0C2J3 SGD1YLR336C 2700 nt0.25□□□□□ -2.37
TY2B-LR1P0C2J3 YEL028WYEL028W 462 nt0.24□□□□□ -2.37
TY2B-LR1P0C2J3 YGL138CYGL138C 1038 nt0.24□□□□□ -2.37
TY2B-LR1P0C2J3 ECM12YHR021W-A 456 nt0.24□□□□□ -2.37
TY2B-LR1P0C2J3 YCL001W-AYCL001W-A 462 nt0.24□□□□□ -2.37
TY2B-LR1P0C2J3 AIM9YER080W 1884 nt0.24□□□□□ -2.37
TY2B-LR1P0C2J3 ECM11YDR446W 909 nt0.24□□□□□ -2.37
TY2B-LR1P0C2J3 YIL141WYIL141W 390 nt0.24□□□□□ -2.37
TY2B-LR1P0C2J3 FYV6YNL133C 522 nt0.24□□□□□ -2.37
TY2B-LR1P0C2J3 CDC5YMR001C 2118 nt0.23□□□□□ -2.37
TY2B-LR1P0C2J3 RRG1YDR065W 1098 nt0.23□□□□□ -2.37
TY2B-LR1P0C2J3 MZM1YDR493W 372 nt0.23□□□□□ -2.37
TY2B-LR1P0C2J3 YIL012WYIL012W 342 nt0.23□□□□□ -2.37
TY2B-LR1P0C2J3 SFM1YOR021C 642 nt0.23□□□□□ -2.37
TY2B-LR1P0C2J3 SWT1YOR166C 1377 nt0.23□□□□□ -2.37
TY2B-LR1P0C2J3 PRM8YGL053W 714 nt0.22□□□□□ -2.37
TY2B-LR1P0C2J3 IRC23YOR044W 474 nt0.22□□□□□ -2.37
TY2B-LR1P0C2J3 GRX7YBR014C 612 nt0.22□□□□□ -2.37
TY2B-LR1P0C2J3 RRP15YPR143W 753 nt0.22□□□□□ -2.37
TY2B-LR1P0C2J3 ADF1YCL058W-A 342 nt0.22□□□□□ -2.37
TY2B-LR1P0C2J3 BPH1YCR032W 6504 nt0.22□□□□□ -2.37
TY2B-LR1P0C2J3 TAN1YGL232W 870 nt0.22□□□□□ -2.37
TY2B-LR1P0C2J3 MRPL25YGR076C 474 nt0.22□□□□□ -2.37
TY2B-LR1P0C2J3 YMR147WYMR147W 672 nt0.22□□□□□ -2.37
TY2B-LR1P0C2J3 NNF2YGR089W 2811 nt0.21□□□□□ -2.38
TY2B-LR1P0C2J3 TAD1YGL243W 1203 nt0.21□□□□□ -2.38
TY2B-LR1P0C2J3 snR13snR13 124 nt0.21□□□□□ -2.38
TY2B-LR1P0C2J3 YDR210W-AYDR210W-A 1317 nt0.21□□□□□ -2.38
TY2B-LR1P0C2J3 YOR343W-AYOR343W-A 1317 nt0.21□□□□□ -2.38
TY2B-LR1P0C2J3 SWS2YNL081C 432 nt0.2□□□□□ -2.38
TY2B-LR1P0C2J3 YOR376WYOR376W 369 nt0.2□□□□□ -2.38
TY2B-LR1P0C2J3 STB6YKL072W 2301 nt0.2□□□□□ -2.38
TY2B-LR1P0C2J3 YER088C-AYER088C-A 324 nt0.19□□□□□ -2.38
TY2B-LR1P0C2J3 HHT1YBR010W 411 nt0.19□□□□□ -2.38
TY2B-LR1P0C2J3 PEX34YCL056C 435 nt0.19□□□□□ -2.38
TY2B-LR1P0C2J3 COBQ0105 1158 nt0.19□□□□□ -2.38
TY2B-LR1P0C2J3 YGR114CYGR114C 390 nt0.19□□□□□ -2.38
TY2B-LR1P0C2J3 YOR053WYOR053W 342 nt0.18□□□□□ -2.38
Retrieved 100 of 7,029 protein–RNA pairs in 17 ms