Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.76■□□□□ 0.59
THBS1P07996 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.75■□□□□ 0.59
THBS1P07996 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
THBS1P07996 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
THBS1P07996 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.75■□□□□ 0.59
THBS1P07996 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.75■□□□□ 0.59
THBS1P07996 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.75■□□□□ 0.59
THBS1P07996 AL162412.1-201ENST00000567129 965 ntBASIC18.75■□□□□ 0.59
THBS1P07996 AL591742.1-201ENST00000604433 565 ntBASIC18.75■□□□□ 0.59
THBS1P07996 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.75■□□□□ 0.59
THBS1P07996 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
THBS1P07996 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.75■□□□□ 0.59
THBS1P07996 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
THBS1P07996 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
THBS1P07996 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.75■□□□□ 0.59
THBS1P07996 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
THBS1P07996 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
THBS1P07996 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
THBS1P07996 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
THBS1P07996 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
THBS1P07996 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
THBS1P07996 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
THBS1P07996 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
THBS1P07996 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
THBS1P07996 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
THBS1P07996 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.74■□□□□ 0.59
THBS1P07996 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
THBS1P07996 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
THBS1P07996 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.74■□□□□ 0.59
THBS1P07996 PGM5P4-201ENST00000421970 445 ntBASIC18.74■□□□□ 0.59
THBS1P07996 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
THBS1P07996 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.74■□□□□ 0.59
THBS1P07996 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.74■□□□□ 0.59
THBS1P07996 AC007322.4-201ENST00000509611 723 ntBASIC18.74■□□□□ 0.59
THBS1P07996 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.74■□□□□ 0.59
THBS1P07996 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.74■□□□□ 0.59
THBS1P07996 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
THBS1P07996 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
THBS1P07996 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
THBS1P07996 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
THBS1P07996 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.74■□□□□ 0.59
THBS1P07996 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
THBS1P07996 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.74■□□□□ 0.59
THBS1P07996 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
THBS1P07996 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.73■□□□□ 0.59
THBS1P07996 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
THBS1P07996 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
THBS1P07996 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
THBS1P07996 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.73■□□□□ 0.59
THBS1P07996 AC099778.1-201ENST00000568593 1911 ntBASIC18.73■□□□□ 0.59
THBS1P07996 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
THBS1P07996 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
THBS1P07996 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
THBS1P07996 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.73■□□□□ 0.59
THBS1P07996 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
THBS1P07996 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.73■□□□□ 0.59
THBS1P07996 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
THBS1P07996 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.73■□□□□ 0.59
THBS1P07996 AC013268.1-206ENST00000638368 961 ntBASIC18.73■□□□□ 0.59
THBS1P07996 AC112229.1-201ENST00000639295 961 ntBASIC18.73■□□□□ 0.59
THBS1P07996 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
THBS1P07996 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
THBS1P07996 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
THBS1P07996 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
THBS1P07996 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
THBS1P07996 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
THBS1P07996 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.73■□□□□ 0.59
THBS1P07996 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
THBS1P07996 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
THBS1P07996 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
THBS1P07996 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
THBS1P07996 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
THBS1P07996 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
THBS1P07996 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
THBS1P07996 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
THBS1P07996 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.72■□□□□ 0.59
THBS1P07996 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.72■□□□□ 0.59
THBS1P07996 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
THBS1P07996 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.72■□□□□ 0.59
THBS1P07996 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.72■□□□□ 0.59
THBS1P07996 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.72■□□□□ 0.59
THBS1P07996 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
THBS1P07996 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
THBS1P07996 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
THBS1P07996 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.72■□□□□ 0.59
THBS1P07996 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
THBS1P07996 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
THBS1P07996 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
THBS1P07996 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
THBS1P07996 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
THBS1P07996 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
THBS1P07996 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
THBS1P07996 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
THBS1P07996 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
THBS1P07996 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
THBS1P07996 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.71■□□□□ 0.59
THBS1P07996 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
THBS1P07996 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.71■□□□□ 0.59
THBS1P07996 AC137761.2-201ENST00000561729 223 ntBASIC18.71■□□□□ 0.59
THBS1P07996 AC145350.3-201ENST00000569033 163 ntBASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms