Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-DQB2P05538 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.69■□□□□ 0.9
HLA-DQB2P05538 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-DQB2P05538 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-DQB2P05538 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-DQB2P05538 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-DQB2P05538 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
HLA-DQB2P05538 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-DQB2P05538 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-DQB2P05538 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.69■□□□□ 0.9
HLA-DQB2P05538 AC006970.2-201ENST00000450065 779 ntBASIC20.69■□□□□ 0.9
HLA-DQB2P05538 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
HLA-DQB2P05538 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-DQB2P05538 CYP2T3P-201ENST00000601990 817 ntBASIC20.69■□□□□ 0.9
HLA-DQB2P05538 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-DQB2P05538 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
HLA-DQB2P05538 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-DQB2P05538 AC092720.2-201ENST00000602388 1665 ntBASIC20.69■□□□□ 0.9
HLA-DQB2P05538 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-DQB2P05538 LINC01521-201ENST00000504184 1943 ntBASIC20.68■□□□□ 0.9
HLA-DQB2P05538 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DQB2P05538 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DQB2P05538 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DQB2P05538 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.68■□□□□ 0.9
HLA-DQB2P05538 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
HLA-DQB2P05538 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
HLA-DQB2P05538 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DQB2P05538 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DQB2P05538 AL512625.2-201ENST00000417533 625 ntBASIC20.68■□□□□ 0.9
HLA-DQB2P05538 PGM5P4-201ENST00000421970 445 ntBASIC20.68■□□□□ 0.9
HLA-DQB2P05538 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DQB2P05538 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
HLA-DQB2P05538 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.68■□□□□ 0.9
HLA-DQB2P05538 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DQB2P05538 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DQB2P05538 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DQB2P05538 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DQB2P05538 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DQB2P05538 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DQB2P05538 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DQB2P05538 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.68■□□□□ 0.9
HLA-DQB2P05538 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.68■□□□□ 0.9
HLA-DQB2P05538 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.68■□□□□ 0.9
HLA-DQB2P05538 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DQB2P05538 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DQB2P05538 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.68■□□□□ 0.9
HLA-DQB2P05538 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.68■□□□□ 0.9
HLA-DQB2P05538 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-DQB2P05538 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-DQB2P05538 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.67■□□□□ 0.9
HLA-DQB2P05538 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-DQB2P05538 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.67■□□□□ 0.9
HLA-DQB2P05538 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-DQB2P05538 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.67■□□□□ 0.9
HLA-DQB2P05538 AF201337.1-201ENST00000520239 748 ntBASIC20.67■□□□□ 0.9
HLA-DQB2P05538 AC105036.2-201ENST00000569468 176 ntBASIC20.67■□□□□ 0.9
HLA-DQB2P05538 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.67■□□□□ 0.9
HLA-DQB2P05538 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
HLA-DQB2P05538 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
HLA-DQB2P05538 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.67■□□□□ 0.9
HLA-DQB2P05538 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-DQB2P05538 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-DQB2P05538 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-DQB2P05538 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-DQB2P05538 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
HLA-DQB2P05538 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.67■□□□□ 0.9
HLA-DQB2P05538 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DQB2P05538 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DQB2P05538 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.66■□□□□ 0.9
HLA-DQB2P05538 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DQB2P05538 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
HLA-DQB2P05538 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DQB2P05538 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DQB2P05538 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DQB2P05538 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.66■□□□□ 0.9
HLA-DQB2P05538 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DQB2P05538 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.66■□□□□ 0.9
HLA-DQB2P05538 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DQB2P05538 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DQB2P05538 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.66■□□□□ 0.9
HLA-DQB2P05538 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DQB2P05538 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DQB2P05538 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.65■□□□□ 0.9
HLA-DQB2P05538 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DQB2P05538 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.65■□□□□ 0.9
HLA-DQB2P05538 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DQB2P05538 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.65■□□□□ 0.9
HLA-DQB2P05538 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DQB2P05538 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
HLA-DQB2P05538 KRT18P68-201ENST00000392293 1000 ntBASIC20.65■□□□□ 0.9
HLA-DQB2P05538 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.65■□□□□ 0.9
HLA-DQB2P05538 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.65■□□□□ 0.9
HLA-DQB2P05538 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.65■□□□□ 0.9
HLA-DQB2P05538 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.65■□□□□ 0.9
HLA-DQB2P05538 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.65■□□□□ 0.9
HLA-DQB2P05538 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
HLA-DQB2P05538 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.65■□□□□ 0.9
HLA-DQB2P05538 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.65■□□□□ 0.9
HLA-DQB2P05538 AC105020.6-201ENST00000621523 1217 ntBASIC20.65■□□□□ 0.9
HLA-DQB2P05538 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms