Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC22.61■■□□□ 1.21
CD4P01730 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CD4P01730 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC22.61■■□□□ 1.21
CD4P01730 PRKY-204ENST00000533551 1019 ntBASIC22.61■■□□□ 1.21
CD4P01730 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC22.61■■□□□ 1.21
CD4P01730 CBFB-203ENST00000561924 584 ntTSL 5 BASIC22.61■■□□□ 1.21
CD4P01730 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
CD4P01730 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CD4P01730 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CD4P01730 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CD4P01730 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
CD4P01730 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC22.6■■□□□ 1.21
CD4P01730 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
CD4P01730 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CD4P01730 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CD4P01730 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
CD4P01730 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CD4P01730 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
CD4P01730 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
CD4P01730 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CD4P01730 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC22.6■■□□□ 1.21
CD4P01730 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC22.6■■□□□ 1.21
CD4P01730 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC22.6■■□□□ 1.21
CD4P01730 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CD4P01730 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC22.6■■□□□ 1.21
CD4P01730 TK2-213ENST00000563369 882 ntTSL 5 BASIC22.6■■□□□ 1.21
CD4P01730 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CD4P01730 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC22.6■■□□□ 1.21
CD4P01730 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CD4P01730 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
CD4P01730 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.6■■□□□ 1.21
CD4P01730 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CD4P01730 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CD4P01730 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC22.6■■□□□ 1.21
CD4P01730 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CD4P01730 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC22.59■■□□□ 1.21
CD4P01730 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC22.59■■□□□ 1.21
CD4P01730 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CD4P01730 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.59■■□□□ 1.21
CD4P01730 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CD4P01730 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
CD4P01730 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CD4P01730 PENK-204ENST00000518770 863 ntTSL 2 BASIC22.59■■□□□ 1.21
CD4P01730 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC22.59■■□□□ 1.21
CD4P01730 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC22.59■■□□□ 1.21
CD4P01730 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC22.59■■□□□ 1.21
CD4P01730 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC22.59■■□□□ 1.21
CD4P01730 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC22.59■■□□□ 1.21
CD4P01730 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CD4P01730 ME2-206ENST00000638410 2289 ntTSL 5 BASIC22.59■■□□□ 1.21
CD4P01730 ME2-210ENST00000639255 2262 ntTSL 5 BASIC22.59■■□□□ 1.21
CD4P01730 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.58■■□□□ 1.21
CD4P01730 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC22.58■■□□□ 1.21
CD4P01730 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
CD4P01730 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CD4P01730 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
CD4P01730 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CD4P01730 MOK-233ENST00000524214 1539 ntTSL 2 BASIC22.58■■□□□ 1.21
CD4P01730 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CD4P01730 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CD4P01730 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CD4P01730 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CD4P01730 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
CD4P01730 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC22.58■■□□□ 1.21
CD4P01730 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
CD4P01730 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
CD4P01730 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
CD4P01730 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.58■■□□□ 1.2
CD4P01730 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC22.58■■□□□ 1.2
CD4P01730 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CD4P01730 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
CD4P01730 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CD4P01730 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.57■■□□□ 1.2
CD4P01730 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC22.57■■□□□ 1.2
CD4P01730 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CD4P01730 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CD4P01730 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC22.57■■□□□ 1.2
CD4P01730 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC22.57■■□□□ 1.2
CD4P01730 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
CD4P01730 CABP2-204ENST00000636477 941 ntTSL 5 BASIC22.57■■□□□ 1.2
CD4P01730 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
CD4P01730 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CD4P01730 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.57■■□□□ 1.2
CD4P01730 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CD4P01730 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CD4P01730 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CD4P01730 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
CD4P01730 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CD4P01730 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.56■■□□□ 1.2
CD4P01730 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CD4P01730 RER1-204ENST00000378518 522 ntTSL 3 BASIC22.56■■□□□ 1.2
CD4P01730 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC22.56■■□□□ 1.2
CD4P01730 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CD4P01730 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
CD4P01730 PPOX-219ENST00000544598 813 ntTSL 2 BASIC22.56■■□□□ 1.2
CD4P01730 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC22.56■■□□□ 1.2
CD4P01730 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC22.56■■□□□ 1.2
CD4P01730 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC22.56■■□□□ 1.2
CD4P01730 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CD4P01730 MFF-203ENST00000349901 1716 ntTSL 2 BASIC22.56■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms