Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
GGPS1O95749 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC22.92■■□□□ 1.26
GGPS1O95749 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
GGPS1O95749 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
GGPS1O95749 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.92■■□□□ 1.26
GGPS1O95749 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
GGPS1O95749 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC22.92■■□□□ 1.26
GGPS1O95749 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
GGPS1O95749 AL024507.2-201ENST00000606070 2574 ntBASIC22.92■■□□□ 1.26
GGPS1O95749 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
GGPS1O95749 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
GGPS1O95749 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC22.92■■□□□ 1.26
GGPS1O95749 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC22.92■■□□□ 1.26
GGPS1O95749 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC22.92■■□□□ 1.26
GGPS1O95749 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC22.92■■□□□ 1.26
GGPS1O95749 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC22.92■■□□□ 1.26
GGPS1O95749 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC22.92■■□□□ 1.26
GGPS1O95749 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
GGPS1O95749 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
GGPS1O95749 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
GGPS1O95749 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
GGPS1O95749 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
GGPS1O95749 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
GGPS1O95749 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
GGPS1O95749 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
GGPS1O95749 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC22.91■■□□□ 1.26
GGPS1O95749 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
GGPS1O95749 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
GGPS1O95749 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
GGPS1O95749 C1QBPP2-201ENST00000528754 825 ntBASIC22.91■■□□□ 1.26
GGPS1O95749 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
GGPS1O95749 AC069544.1-201ENST00000609399 999 ntBASIC22.91■■□□□ 1.26
GGPS1O95749 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
GGPS1O95749 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
GGPS1O95749 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
GGPS1O95749 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC22.91■■□□□ 1.26
GGPS1O95749 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
GGPS1O95749 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC22.9■■□□□ 1.26
GGPS1O95749 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC22.9■■□□□ 1.26
GGPS1O95749 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
GGPS1O95749 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.9■■□□□ 1.26
GGPS1O95749 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
GGPS1O95749 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC22.9■■□□□ 1.26
GGPS1O95749 GGT1-206ENST00000404223 952 ntTSL 2 BASIC22.9■■□□□ 1.26
GGPS1O95749 POM121L13P-201ENST00000422362 380 ntBASIC22.9■■□□□ 1.26
GGPS1O95749 RPPH1-201ENST00000516869 333 ntBASIC22.9■■□□□ 1.26
GGPS1O95749 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC22.9■■□□□ 1.26
GGPS1O95749 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
GGPS1O95749 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
GGPS1O95749 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC22.9■■□□□ 1.26
GGPS1O95749 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
GGPS1O95749 STAC-204ENST00000457375 1366 ntTSL 2 BASIC22.89■■□□□ 1.26
GGPS1O95749 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
GGPS1O95749 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
GGPS1O95749 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
GGPS1O95749 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.25
GGPS1O95749 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
GGPS1O95749 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC22.89■■□□□ 1.25
GGPS1O95749 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC22.89■■□□□ 1.25
GGPS1O95749 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
GGPS1O95749 RHOD-202ENST00000532559 538 ntTSL 3 BASIC22.89■■□□□ 1.25
GGPS1O95749 RN7SL471P-201ENST00000580476 299 ntBASIC22.89■■□□□ 1.25
GGPS1O95749 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
GGPS1O95749 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
GGPS1O95749 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
GGPS1O95749 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
GGPS1O95749 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
GGPS1O95749 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
GGPS1O95749 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC22.89■■□□□ 1.25
GGPS1O95749 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
GGPS1O95749 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
GGPS1O95749 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC22.89■■□□□ 1.25
GGPS1O95749 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
GGPS1O95749 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
GGPS1O95749 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.88■■□□□ 1.25
GGPS1O95749 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
GGPS1O95749 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
GGPS1O95749 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC22.88■■□□□ 1.25
GGPS1O95749 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
GGPS1O95749 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
GGPS1O95749 RNF121-214ENST00000533380 870 ntTSL 3 BASIC22.88■■□□□ 1.25
GGPS1O95749 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
GGPS1O95749 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC22.88■■□□□ 1.25
GGPS1O95749 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC22.88■■□□□ 1.25
GGPS1O95749 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
GGPS1O95749 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
GGPS1O95749 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC22.87■■□□□ 1.25
GGPS1O95749 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
GGPS1O95749 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
GGPS1O95749 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
GGPS1O95749 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC22.87■■□□□ 1.25
GGPS1O95749 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
GGPS1O95749 AC027702.1-201ENST00000563810 1770 ntBASIC22.87■■□□□ 1.25
GGPS1O95749 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
GGPS1O95749 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC22.87■■□□□ 1.25
GGPS1O95749 UBE2SP1-201ENST00000450587 669 ntBASIC22.87■■□□□ 1.25
GGPS1O95749 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC22.87■■□□□ 1.25
GGPS1O95749 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC22.87■■□□□ 1.25
GGPS1O95749 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC22.87■■□□□ 1.25
GGPS1O95749 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC22.87■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms