Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
VAPBO95292 AC137761.2-201ENST00000561729 223 ntBASIC20.46■□□□□ 0.87
VAPBO95292 AC145350.3-201ENST00000569033 163 ntBASIC20.46■□□□□ 0.87
VAPBO95292 AC010536.3-201ENST00000620306 533 ntBASIC20.46■□□□□ 0.87
VAPBO95292 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.46■□□□□ 0.87
VAPBO95292 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.46■□□□□ 0.87
VAPBO95292 AL162377.1-201ENST00000618844 1793 ntBASIC20.46■□□□□ 0.87
VAPBO95292 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VAPBO95292 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
VAPBO95292 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.46■□□□□ 0.87
VAPBO95292 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
VAPBO95292 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VAPBO95292 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VAPBO95292 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.45■□□□□ 0.86
VAPBO95292 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
VAPBO95292 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.45■□□□□ 0.86
VAPBO95292 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
VAPBO95292 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
VAPBO95292 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
VAPBO95292 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.45■□□□□ 0.86
VAPBO95292 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.45■□□□□ 0.86
VAPBO95292 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
VAPBO95292 TERF1P5-201ENST00000477545 1207 ntBASIC20.45■□□□□ 0.86
VAPBO95292 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VAPBO95292 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.45■□□□□ 0.86
VAPBO95292 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.45■□□□□ 0.86
VAPBO95292 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
VAPBO95292 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.45■□□□□ 0.86
VAPBO95292 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VAPBO95292 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VAPBO95292 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VAPBO95292 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.44■□□□□ 0.86
VAPBO95292 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.44■□□□□ 0.86
VAPBO95292 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.44■□□□□ 0.86
VAPBO95292 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VAPBO95292 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VAPBO95292 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VAPBO95292 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
VAPBO95292 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
VAPBO95292 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.44■□□□□ 0.86
VAPBO95292 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.44■□□□□ 0.86
VAPBO95292 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.44■□□□□ 0.86
VAPBO95292 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.44■□□□□ 0.86
VAPBO95292 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
VAPBO95292 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.44■□□□□ 0.86
VAPBO95292 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
VAPBO95292 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VAPBO95292 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
VAPBO95292 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.44■□□□□ 0.86
VAPBO95292 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
VAPBO95292 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
VAPBO95292 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VAPBO95292 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
VAPBO95292 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.43■□□□□ 0.86
VAPBO95292 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
VAPBO95292 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VAPBO95292 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.43■□□□□ 0.86
VAPBO95292 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
VAPBO95292 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.43■□□□□ 0.86
VAPBO95292 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.43■□□□□ 0.86
VAPBO95292 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.43■□□□□ 0.86
VAPBO95292 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
VAPBO95292 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VAPBO95292 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
VAPBO95292 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VAPBO95292 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
VAPBO95292 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
VAPBO95292 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.43■□□□□ 0.86
VAPBO95292 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.43■□□□□ 0.86
VAPBO95292 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.43■□□□□ 0.86
VAPBO95292 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VAPBO95292 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
VAPBO95292 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.42■□□□□ 0.86
VAPBO95292 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VAPBO95292 AC112907.3-201ENST00000577781 2400 ntBASIC20.42■□□□□ 0.86
VAPBO95292 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VAPBO95292 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VAPBO95292 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.42■□□□□ 0.86
VAPBO95292 KRT18P11-201ENST00000435214 1283 ntBASIC20.42■□□□□ 0.86
VAPBO95292 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VAPBO95292 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VAPBO95292 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
VAPBO95292 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
VAPBO95292 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
VAPBO95292 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.42■□□□□ 0.86
VAPBO95292 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VAPBO95292 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
VAPBO95292 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VAPBO95292 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VAPBO95292 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VAPBO95292 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.41■□□□□ 0.86
VAPBO95292 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.41■□□□□ 0.86
VAPBO95292 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
VAPBO95292 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.41■□□□□ 0.86
VAPBO95292 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VAPBO95292 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
VAPBO95292 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
VAPBO95292 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
VAPBO95292 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.41■□□□□ 0.86
VAPBO95292 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms