Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TNRC18O15417 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC22.51■■□□□ 1.19
TNRC18O15417 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
TNRC18O15417 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
TNRC18O15417 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TNRC18O15417 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC22.5■■□□□ 1.19
TNRC18O15417 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TNRC18O15417 AL138966.2-201ENST00000621997 464 ntBASIC22.5■■□□□ 1.19
TNRC18O15417 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TNRC18O15417 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TNRC18O15417 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TNRC18O15417 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TNRC18O15417 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
TNRC18O15417 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TNRC18O15417 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TNRC18O15417 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC22.5■■□□□ 1.19
TNRC18O15417 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TNRC18O15417 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC22.49■■□□□ 1.19
TNRC18O15417 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TNRC18O15417 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC22.49■■□□□ 1.19
TNRC18O15417 AL121829.2-201ENST00000620908 328 ntBASIC22.49■■□□□ 1.19
TNRC18O15417 AC011558.1-201ENST00000623459 338 ntBASIC22.49■■□□□ 1.19
TNRC18O15417 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC22.49■■□□□ 1.19
TNRC18O15417 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC22.49■■□□□ 1.19
TNRC18O15417 CKBP1-201ENST00000565489 1086 ntBASIC22.49■■□□□ 1.19
TNRC18O15417 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TNRC18O15417 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TNRC18O15417 SKP2-204ENST00000508514 821 ntTSL 3 BASIC22.48■■□□□ 1.19
TNRC18O15417 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC22.48■■□□□ 1.19
TNRC18O15417 AC083849.1-201ENST00000615227 514 ntBASIC22.48■■□□□ 1.19
TNRC18O15417 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
TNRC18O15417 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TNRC18O15417 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC22.48■■□□□ 1.19
TNRC18O15417 RPP21-221ENST00000428040 594 ntTSL 2 BASIC22.48■■□□□ 1.19
TNRC18O15417 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TNRC18O15417 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC22.48■■□□□ 1.19
TNRC18O15417 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TNRC18O15417 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC22.47■■□□□ 1.19
TNRC18O15417 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC22.47■■□□□ 1.19
TNRC18O15417 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TNRC18O15417 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TNRC18O15417 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TNRC18O15417 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC22.47■■□□□ 1.19
TNRC18O15417 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
TNRC18O15417 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TNRC18O15417 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TNRC18O15417 FXN-203ENST00000396366 922 ntTSL 2 BASIC22.47■■□□□ 1.19
TNRC18O15417 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TNRC18O15417 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC22.47■■□□□ 1.19
TNRC18O15417 UNC93B7-201ENST00000509439 705 ntBASIC22.47■■□□□ 1.19
TNRC18O15417 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
TNRC18O15417 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.47■■□□□ 1.19
TNRC18O15417 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TNRC18O15417 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC22.47■■□□□ 1.19
TNRC18O15417 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
TNRC18O15417 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
TNRC18O15417 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TNRC18O15417 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TNRC18O15417 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC22.47■■□□□ 1.19
TNRC18O15417 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC22.47■■□□□ 1.19
TNRC18O15417 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
TNRC18O15417 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
TNRC18O15417 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
TNRC18O15417 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TNRC18O15417 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
TNRC18O15417 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
TNRC18O15417 KSR1P1-201ENST00000446298 240 ntBASIC22.46■■□□□ 1.19
TNRC18O15417 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC22.46■■□□□ 1.19
TNRC18O15417 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
TNRC18O15417 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TNRC18O15417 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TNRC18O15417 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC22.46■■□□□ 1.19
TNRC18O15417 NIFKP9-201ENST00000419265 221 ntBASIC22.46■■□□□ 1.19
TNRC18O15417 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TNRC18O15417 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
TNRC18O15417 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.46■■□□□ 1.19
TNRC18O15417 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
TNRC18O15417 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
TNRC18O15417 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC22.45■■□□□ 1.18
TNRC18O15417 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TNRC18O15417 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
TNRC18O15417 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
TNRC18O15417 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
TNRC18O15417 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC22.45■■□□□ 1.18
TNRC18O15417 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
TNRC18O15417 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
TNRC18O15417 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
TNRC18O15417 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC22.44■■□□□ 1.18
TNRC18O15417 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
TNRC18O15417 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC22.44■■□□□ 1.18
TNRC18O15417 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
TNRC18O15417 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TNRC18O15417 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
TNRC18O15417 KRT18P13-201ENST00000400056 1290 ntBASIC22.44■■□□□ 1.18
TNRC18O15417 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
TNRC18O15417 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
TNRC18O15417 AC104692.2-201ENST00000603054 253 ntBASIC22.44■■□□□ 1.18
TNRC18O15417 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
TNRC18O15417 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TNRC18O15417 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms