Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SPTLC1O15269 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.08
SPTLC1O15269 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
SPTLC1O15269 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SPTLC1O15269 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
SPTLC1O15269 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
SPTLC1O15269 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.83■■□□□ 1.08
SPTLC1O15269 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SPTLC1O15269 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
SPTLC1O15269 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SPTLC1O15269 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SPTLC1O15269 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SPTLC1O15269 PGM5P4-201ENST00000421970 445 ntBASIC21.82■■□□□ 1.08
SPTLC1O15269 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.82■■□□□ 1.08
SPTLC1O15269 UNC93B5-201ENST00000530315 699 ntBASIC21.82■■□□□ 1.08
SPTLC1O15269 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.82■■□□□ 1.08
SPTLC1O15269 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SPTLC1O15269 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SPTLC1O15269 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.82■■□□□ 1.08
SPTLC1O15269 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SPTLC1O15269 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.82■■□□□ 1.08
SPTLC1O15269 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.82■■□□□ 1.08
SPTLC1O15269 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.82■■□□□ 1.08
SPTLC1O15269 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SPTLC1O15269 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.82■■□□□ 1.08
SPTLC1O15269 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SPTLC1O15269 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.82■■□□□ 1.08
SPTLC1O15269 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
SPTLC1O15269 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SPTLC1O15269 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.81■■□□□ 1.08
SPTLC1O15269 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SPTLC1O15269 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SPTLC1O15269 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.81■■□□□ 1.08
SPTLC1O15269 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
SPTLC1O15269 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SPTLC1O15269 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SPTLC1O15269 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.81■■□□□ 1.08
SPTLC1O15269 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SPTLC1O15269 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.81■■□□□ 1.08
SPTLC1O15269 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.81■■□□□ 1.08
SPTLC1O15269 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SPTLC1O15269 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.81■■□□□ 1.08
SPTLC1O15269 AC060766.5-201ENST00000590539 871 ntBASIC21.81■■□□□ 1.08
SPTLC1O15269 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
SPTLC1O15269 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SPTLC1O15269 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SPTLC1O15269 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SPTLC1O15269 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SPTLC1O15269 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SPTLC1O15269 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SPTLC1O15269 KRT8P36-201ENST00000489121 1440 ntBASIC21.8■■□□□ 1.08
SPTLC1O15269 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SPTLC1O15269 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SPTLC1O15269 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SPTLC1O15269 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SPTLC1O15269 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SPTLC1O15269 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SPTLC1O15269 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SPTLC1O15269 ESRRAP1-201ENST00000400596 1257 ntBASIC21.8■■□□□ 1.08
SPTLC1O15269 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SPTLC1O15269 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.8■■□□□ 1.08
SPTLC1O15269 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SPTLC1O15269 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SPTLC1O15269 AL121603.2-201ENST00000557373 2117 ntBASIC21.8■■□□□ 1.08
SPTLC1O15269 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
SPTLC1O15269 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
SPTLC1O15269 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SPTLC1O15269 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SPTLC1O15269 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.79■■□□□ 1.08
SPTLC1O15269 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SPTLC1O15269 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SPTLC1O15269 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
SPTLC1O15269 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SPTLC1O15269 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
SPTLC1O15269 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SPTLC1O15269 RPS2P52-201ENST00000469610 820 ntBASIC21.79■■□□□ 1.08
SPTLC1O15269 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.79■■□□□ 1.08
SPTLC1O15269 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SPTLC1O15269 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.79■■□□□ 1.08
SPTLC1O15269 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.79■■□□□ 1.08
SPTLC1O15269 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SPTLC1O15269 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.78■■□□□ 1.08
SPTLC1O15269 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SPTLC1O15269 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SPTLC1O15269 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SPTLC1O15269 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SPTLC1O15269 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SPTLC1O15269 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SPTLC1O15269 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.78■■□□□ 1.08
SPTLC1O15269 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SPTLC1O15269 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.78■■□□□ 1.08
SPTLC1O15269 PNMA6B-201ENST00000538162 1200 ntBASIC21.78■■□□□ 1.08
SPTLC1O15269 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.78■■□□□ 1.08
SPTLC1O15269 AC008403.3-201ENST00000598924 454 ntBASIC21.78■■□□□ 1.08
SPTLC1O15269 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.78■■□□□ 1.08
SPTLC1O15269 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SPTLC1O15269 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SPTLC1O15269 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SPTLC1O15269 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.78■■□□□ 1.08
SPTLC1O15269 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms