Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KPNA4O00629 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.97■□□□□ 0.63
KPNA4O00629 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KPNA4O00629 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
KPNA4O00629 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.97■□□□□ 0.63
KPNA4O00629 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.97■□□□□ 0.63
KPNA4O00629 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KPNA4O00629 AC105265.2-201ENST00000467189 838 ntBASIC18.97■□□□□ 0.63
KPNA4O00629 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.97■□□□□ 0.63
KPNA4O00629 TPRG1LP1-201ENST00000598702 760 ntBASIC18.97■□□□□ 0.63
KPNA4O00629 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.97■□□□□ 0.63
KPNA4O00629 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KPNA4O00629 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
KPNA4O00629 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KPNA4O00629 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.97■□□□□ 0.63
KPNA4O00629 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
KPNA4O00629 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.97■□□□□ 0.63
KPNA4O00629 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KPNA4O00629 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KPNA4O00629 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KPNA4O00629 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
KPNA4O00629 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.96■□□□□ 0.63
KPNA4O00629 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.96■□□□□ 0.63
KPNA4O00629 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KPNA4O00629 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
KPNA4O00629 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.96■□□□□ 0.63
KPNA4O00629 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
KPNA4O00629 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
KPNA4O00629 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.96■□□□□ 0.63
KPNA4O00629 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.96■□□□□ 0.63
KPNA4O00629 AC005837.3-201ENST00000612163 286 ntBASIC18.96■□□□□ 0.63
KPNA4O00629 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.96■□□□□ 0.63
KPNA4O00629 AL358852.1-201ENST00000623174 1268 ntBASIC18.96■□□□□ 0.63
KPNA4O00629 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KPNA4O00629 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.96■□□□□ 0.63
KPNA4O00629 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KPNA4O00629 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KPNA4O00629 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
KPNA4O00629 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KPNA4O00629 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
KPNA4O00629 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
KPNA4O00629 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.95■□□□□ 0.62
KPNA4O00629 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KPNA4O00629 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KPNA4O00629 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KPNA4O00629 AC121338.2-201ENST00000622535 1744 ntBASIC18.95■□□□□ 0.62
KPNA4O00629 AC061975.6-201ENST00000579045 1553 ntBASIC18.95■□□□□ 0.62
KPNA4O00629 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
KPNA4O00629 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.95■□□□□ 0.62
KPNA4O00629 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
KPNA4O00629 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.95■□□□□ 0.62
KPNA4O00629 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KPNA4O00629 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.95■□□□□ 0.62
KPNA4O00629 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
KPNA4O00629 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KPNA4O00629 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KPNA4O00629 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KPNA4O00629 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KPNA4O00629 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.95■□□□□ 0.62
KPNA4O00629 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.95■□□□□ 0.62
KPNA4O00629 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
KPNA4O00629 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.94■□□□□ 0.62
KPNA4O00629 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.94■□□□□ 0.62
KPNA4O00629 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KPNA4O00629 EEF1DP3-203ENST00000566025 782 ntBASIC18.94■□□□□ 0.62
KPNA4O00629 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.94■□□□□ 0.62
KPNA4O00629 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
KPNA4O00629 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KPNA4O00629 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
KPNA4O00629 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KPNA4O00629 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
KPNA4O00629 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.93■□□□□ 0.62
KPNA4O00629 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KPNA4O00629 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
KPNA4O00629 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KPNA4O00629 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KPNA4O00629 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KPNA4O00629 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
KPNA4O00629 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.93■□□□□ 0.62
KPNA4O00629 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.93■□□□□ 0.62
KPNA4O00629 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.93■□□□□ 0.62
KPNA4O00629 IRS3P-201ENST00000223076 1006 ntBASIC18.93■□□□□ 0.62
KPNA4O00629 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KPNA4O00629 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
KPNA4O00629 AC079140.4-201ENST00000507448 529 ntBASIC18.93■□□□□ 0.62
KPNA4O00629 AC053503.5-201ENST00000601508 636 ntBASIC18.93■□□□□ 0.62
KPNA4O00629 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KPNA4O00629 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.93■□□□□ 0.62
KPNA4O00629 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KPNA4O00629 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KPNA4O00629 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
KPNA4O00629 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
KPNA4O00629 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KPNA4O00629 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KPNA4O00629 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
KPNA4O00629 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KPNA4O00629 PCDHAC2-203ENST00000615316 3011 ntBASIC18.92■□□□□ 0.62
KPNA4O00629 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.92■□□□□ 0.62
KPNA4O00629 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
KPNA4O00629 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms