Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 NXN-202ENST00000537628 1340 ntTSL 3 BASIC22.95■■□□□ 1.26
DDX39AO00148 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
DDX39AO00148 AL137060.1-201ENST00000618151 2648 ntBASIC22.95■■□□□ 1.26
DDX39AO00148 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC22.95■■□□□ 1.26
DDX39AO00148 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
DDX39AO00148 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
DDX39AO00148 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
DDX39AO00148 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
DDX39AO00148 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
DDX39AO00148 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
DDX39AO00148 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC22.94■■□□□ 1.26
DDX39AO00148 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC22.94■■□□□ 1.26
DDX39AO00148 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
DDX39AO00148 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
DDX39AO00148 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
DDX39AO00148 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
DDX39AO00148 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC22.93■■□□□ 1.26
DDX39AO00148 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
DDX39AO00148 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
DDX39AO00148 GAS7-202ENST00000396115 929 ntTSL 5 BASIC22.93■■□□□ 1.26
DDX39AO00148 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC22.93■■□□□ 1.26
DDX39AO00148 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC22.93■■□□□ 1.26
DDX39AO00148 POU5F1P3-201ENST00000428824 1078 ntBASIC22.93■■□□□ 1.26
DDX39AO00148 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC22.93■■□□□ 1.26
DDX39AO00148 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC22.93■■□□□ 1.26
DDX39AO00148 C2orf69P4-201ENST00000565394 541 ntBASIC22.93■■□□□ 1.26
DDX39AO00148 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
DDX39AO00148 MIR2861-201ENST00000636310 90 ntBASIC22.93■■□□□ 1.26
DDX39AO00148 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
DDX39AO00148 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
DDX39AO00148 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC22.93■■□□□ 1.26
DDX39AO00148 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
DDX39AO00148 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC22.92■■□□□ 1.26
DDX39AO00148 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC22.92■■□□□ 1.26
DDX39AO00148 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
DDX39AO00148 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC22.92■■□□□ 1.26
DDX39AO00148 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC22.92■■□□□ 1.26
DDX39AO00148 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC22.92■■□□□ 1.26
DDX39AO00148 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC22.92■■□□□ 1.26
DDX39AO00148 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC22.92■■□□□ 1.26
DDX39AO00148 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
DDX39AO00148 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC22.92■■□□□ 1.26
DDX39AO00148 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
DDX39AO00148 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
DDX39AO00148 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
DDX39AO00148 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC22.91■■□□□ 1.26
DDX39AO00148 ERF-202ENST00000440177 2032 ntTSL 2 BASIC22.91■■□□□ 1.26
DDX39AO00148 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
DDX39AO00148 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
DDX39AO00148 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
DDX39AO00148 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
DDX39AO00148 ESRRAP1-201ENST00000400596 1257 ntBASIC22.91■■□□□ 1.26
DDX39AO00148 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
DDX39AO00148 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC22.91■■□□□ 1.26
DDX39AO00148 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC22.91■■□□□ 1.26
DDX39AO00148 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
DDX39AO00148 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC22.91■■□□□ 1.26
DDX39AO00148 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC22.91■■□□□ 1.26
DDX39AO00148 AC060766.5-201ENST00000590539 871 ntBASIC22.91■■□□□ 1.26
DDX39AO00148 AC092368.3-202ENST00000574180 1591 ntBASIC22.91■■□□□ 1.26
DDX39AO00148 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
DDX39AO00148 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
DDX39AO00148 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
DDX39AO00148 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
DDX39AO00148 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC22.9■■□□□ 1.26
DDX39AO00148 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC22.9■■□□□ 1.26
DDX39AO00148 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
DDX39AO00148 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC22.9■■□□□ 1.26
DDX39AO00148 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
DDX39AO00148 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
DDX39AO00148 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
DDX39AO00148 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
DDX39AO00148 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
DDX39AO00148 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC22.9■■□□□ 1.26
DDX39AO00148 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
DDX39AO00148 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC22.9■■□□□ 1.26
DDX39AO00148 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
DDX39AO00148 TMEM191A-211ENST00000637163 1067 ntBASIC22.9■■□□□ 1.26
DDX39AO00148 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
DDX39AO00148 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
DDX39AO00148 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
DDX39AO00148 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
DDX39AO00148 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
DDX39AO00148 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
DDX39AO00148 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
DDX39AO00148 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
DDX39AO00148 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
DDX39AO00148 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
DDX39AO00148 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
DDX39AO00148 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC22.89■■□□□ 1.26
DDX39AO00148 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC22.89■■□□□ 1.26
DDX39AO00148 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC22.89■■□□□ 1.26
DDX39AO00148 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC22.89■■□□□ 1.26
DDX39AO00148 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
DDX39AO00148 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
DDX39AO00148 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC22.89■■□□□ 1.25
DDX39AO00148 UNC93B5-201ENST00000530315 699 ntBASIC22.89■■□□□ 1.25
DDX39AO00148 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC22.89■■□□□ 1.25
DDX39AO00148 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC22.89■■□□□ 1.25
DDX39AO00148 AL121603.2-201ENST00000557373 2117 ntBASIC22.89■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms