Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CFAP99D6REC4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.28■□□□□ 0.84
CFAP99D6REC4 AIRN-201ENST00000601203 4374 ntBASIC20.27■□□□□ 0.84
CFAP99D6REC4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CFAP99D6REC4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.27■□□□□ 0.84
CFAP99D6REC4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CFAP99D6REC4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CFAP99D6REC4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CFAP99D6REC4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CFAP99D6REC4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CFAP99D6REC4 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CFAP99D6REC4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.27■□□□□ 0.84
CFAP99D6REC4 CROCCP5-201ENST00000436658 830 ntBASIC20.27■□□□□ 0.84
CFAP99D6REC4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CFAP99D6REC4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.27■□□□□ 0.83
CFAP99D6REC4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
CFAP99D6REC4 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
CFAP99D6REC4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CFAP99D6REC4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.83
CFAP99D6REC4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CFAP99D6REC4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CFAP99D6REC4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.26■□□□□ 0.83
CFAP99D6REC4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CFAP99D6REC4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CFAP99D6REC4 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CFAP99D6REC4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.26■□□□□ 0.83
CFAP99D6REC4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CFAP99D6REC4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
CFAP99D6REC4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CFAP99D6REC4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.26■□□□□ 0.83
CFAP99D6REC4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CFAP99D6REC4 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CFAP99D6REC4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CFAP99D6REC4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CFAP99D6REC4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CFAP99D6REC4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CFAP99D6REC4 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CFAP99D6REC4 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CFAP99D6REC4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CFAP99D6REC4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CFAP99D6REC4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CFAP99D6REC4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CFAP99D6REC4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CFAP99D6REC4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CFAP99D6REC4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CFAP99D6REC4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.25■□□□□ 0.83
CFAP99D6REC4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CFAP99D6REC4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CFAP99D6REC4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.25■□□□□ 0.83
CFAP99D6REC4 AL512625.2-201ENST00000417533 625 ntBASIC20.25■□□□□ 0.83
CFAP99D6REC4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CFAP99D6REC4 AF201337.1-201ENST00000520239 748 ntBASIC20.25■□□□□ 0.83
CFAP99D6REC4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CFAP99D6REC4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CFAP99D6REC4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.25■□□□□ 0.83
CFAP99D6REC4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.25■□□□□ 0.83
CFAP99D6REC4 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CFAP99D6REC4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
CFAP99D6REC4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CFAP99D6REC4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
CFAP99D6REC4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CFAP99D6REC4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CFAP99D6REC4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CFAP99D6REC4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CFAP99D6REC4 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CFAP99D6REC4 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CFAP99D6REC4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CFAP99D6REC4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CFAP99D6REC4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
CFAP99D6REC4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CFAP99D6REC4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.24■□□□□ 0.83
CFAP99D6REC4 MCRIP2P1-201ENST00000394346 511 ntBASIC20.24■□□□□ 0.83
CFAP99D6REC4 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.24■□□□□ 0.83
CFAP99D6REC4 AC090192.1-201ENST00000517740 490 ntBASIC20.24■□□□□ 0.83
CFAP99D6REC4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
CFAP99D6REC4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.24■□□□□ 0.83
CFAP99D6REC4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CFAP99D6REC4 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CFAP99D6REC4 CYP21A1P-202ENST00000354927 1481 ntBASIC20.24■□□□□ 0.83
CFAP99D6REC4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CFAP99D6REC4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CFAP99D6REC4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CFAP99D6REC4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CFAP99D6REC4 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.24■□□□□ 0.83
CFAP99D6REC4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CFAP99D6REC4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CFAP99D6REC4 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CFAP99D6REC4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CFAP99D6REC4 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CFAP99D6REC4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CFAP99D6REC4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CFAP99D6REC4 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CFAP99D6REC4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.23■□□□□ 0.83
CFAP99D6REC4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CFAP99D6REC4 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.23■□□□□ 0.83
CFAP99D6REC4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.23■□□□□ 0.83
CFAP99D6REC4 AC105036.2-201ENST00000569468 176 ntBASIC20.23■□□□□ 0.83
CFAP99D6REC4 AL121832.2-201ENST00000610979 668 ntBASIC20.23■□□□□ 0.83
CFAP99D6REC4 AL050303.2-201ENST00000619798 666 ntBASIC20.23■□□□□ 0.83
CFAP99D6REC4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms