Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TBC1D3BA6NDS4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.75■□□□□ 0.91
TBC1D3BA6NDS4 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TBC1D3BA6NDS4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TBC1D3BA6NDS4 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TBC1D3BA6NDS4 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
TBC1D3BA6NDS4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
TBC1D3BA6NDS4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
TBC1D3BA6NDS4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TBC1D3BA6NDS4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TBC1D3BA6NDS4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TBC1D3BA6NDS4 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
TBC1D3BA6NDS4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TBC1D3BA6NDS4 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TBC1D3BA6NDS4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TBC1D3BA6NDS4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
TBC1D3BA6NDS4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TBC1D3BA6NDS4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.74■□□□□ 0.91
TBC1D3BA6NDS4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.74■□□□□ 0.91
TBC1D3BA6NDS4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.74■□□□□ 0.91
TBC1D3BA6NDS4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
TBC1D3BA6NDS4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
TBC1D3BA6NDS4 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
TBC1D3BA6NDS4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TBC1D3BA6NDS4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TBC1D3BA6NDS4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.73■□□□□ 0.91
TBC1D3BA6NDS4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TBC1D3BA6NDS4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TBC1D3BA6NDS4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.73■□□□□ 0.91
TBC1D3BA6NDS4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
TBC1D3BA6NDS4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
TBC1D3BA6NDS4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.73■□□□□ 0.91
TBC1D3BA6NDS4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TBC1D3BA6NDS4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.73■□□□□ 0.91
TBC1D3BA6NDS4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TBC1D3BA6NDS4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
TBC1D3BA6NDS4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.73■□□□□ 0.91
TBC1D3BA6NDS4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TBC1D3BA6NDS4 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TBC1D3BA6NDS4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TBC1D3BA6NDS4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TBC1D3BA6NDS4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.73■□□□□ 0.91
TBC1D3BA6NDS4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
TBC1D3BA6NDS4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TBC1D3BA6NDS4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TBC1D3BA6NDS4 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.73■□□□□ 0.91
TBC1D3BA6NDS4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.73■□□□□ 0.91
TBC1D3BA6NDS4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TBC1D3BA6NDS4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.72■□□□□ 0.91
TBC1D3BA6NDS4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.72■□□□□ 0.91
TBC1D3BA6NDS4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.72■□□□□ 0.91
TBC1D3BA6NDS4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.72■□□□□ 0.91
TBC1D3BA6NDS4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TBC1D3BA6NDS4 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TBC1D3BA6NDS4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.72■□□□□ 0.91
TBC1D3BA6NDS4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TBC1D3BA6NDS4 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TBC1D3BA6NDS4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TBC1D3BA6NDS4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
TBC1D3BA6NDS4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TBC1D3BA6NDS4 Z98882.1-201ENST00000622160 2253 ntBASIC20.72■□□□□ 0.91
TBC1D3BA6NDS4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TBC1D3BA6NDS4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TBC1D3BA6NDS4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TBC1D3BA6NDS4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TBC1D3BA6NDS4 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TBC1D3BA6NDS4 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TBC1D3BA6NDS4 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.72■□□□□ 0.91
TBC1D3BA6NDS4 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.72■□□□□ 0.91
TBC1D3BA6NDS4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TBC1D3BA6NDS4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TBC1D3BA6NDS4 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.71■□□□□ 0.91
TBC1D3BA6NDS4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TBC1D3BA6NDS4 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TBC1D3BA6NDS4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.71■□□□□ 0.91
TBC1D3BA6NDS4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
TBC1D3BA6NDS4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TBC1D3BA6NDS4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TBC1D3BA6NDS4 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.71■□□□□ 0.91
TBC1D3BA6NDS4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TBC1D3BA6NDS4 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.71■□□□□ 0.91
TBC1D3BA6NDS4 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.71■□□□□ 0.91
TBC1D3BA6NDS4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.71■□□□□ 0.91
TBC1D3BA6NDS4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.71■□□□□ 0.91
TBC1D3BA6NDS4 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.71■□□□□ 0.91
TBC1D3BA6NDS4 Z99916.2-201ENST00000604037 246 ntBASIC20.71■□□□□ 0.91
TBC1D3BA6NDS4 MTDHP1-201ENST00000605323 784 ntBASIC20.71■□□□□ 0.91
TBC1D3BA6NDS4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TBC1D3BA6NDS4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TBC1D3BA6NDS4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TBC1D3BA6NDS4 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.71■□□□□ 0.91
TBC1D3BA6NDS4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TBC1D3BA6NDS4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TBC1D3BA6NDS4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TBC1D3BA6NDS4 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
TBC1D3BA6NDS4 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
TBC1D3BA6NDS4 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.7■□□□□ 0.9
TBC1D3BA6NDS4 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.7■□□□□ 0.9
TBC1D3BA6NDS4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TBC1D3BA6NDS4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms