Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC162PA2VCL2 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC162PA2VCL2 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC162PA2VCL2 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC162PA2VCL2 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.37■□□□□ 0.85
CCDC162PA2VCL2 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC162PA2VCL2 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC162PA2VCL2 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC162PA2VCL2 AC004911.1-201ENST00000416316 871 ntBASIC20.37■□□□□ 0.85
CCDC162PA2VCL2 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.37■□□□□ 0.85
CCDC162PA2VCL2 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC162PA2VCL2 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC162PA2VCL2 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.37■□□□□ 0.85
CCDC162PA2VCL2 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC162PA2VCL2 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
CCDC162PA2VCL2 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC162PA2VCL2 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
CCDC162PA2VCL2 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC162PA2VCL2 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CCDC162PA2VCL2 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC162PA2VCL2 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC162PA2VCL2 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC162PA2VCL2 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CCDC162PA2VCL2 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.36■□□□□ 0.85
CCDC162PA2VCL2 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC162PA2VCL2 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC162PA2VCL2 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.36■□□□□ 0.85
CCDC162PA2VCL2 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.36■□□□□ 0.85
CCDC162PA2VCL2 AC073130.3-201ENST00000624389 2278 ntBASIC20.36■□□□□ 0.85
CCDC162PA2VCL2 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC162PA2VCL2 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC162PA2VCL2 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
CCDC162PA2VCL2 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC162PA2VCL2 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC162PA2VCL2 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.36■□□□□ 0.85
CCDC162PA2VCL2 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.36■□□□□ 0.85
CCDC162PA2VCL2 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
CCDC162PA2VCL2 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.36■□□□□ 0.85
CCDC162PA2VCL2 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC162PA2VCL2 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC162PA2VCL2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC162PA2VCL2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC162PA2VCL2 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.36■□□□□ 0.85
CCDC162PA2VCL2 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC162PA2VCL2 KRT8P36-201ENST00000489121 1440 ntBASIC20.36■□□□□ 0.85
CCDC162PA2VCL2 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC162PA2VCL2 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC162PA2VCL2 AC092720.2-201ENST00000602388 1665 ntBASIC20.35■□□□□ 0.85
CCDC162PA2VCL2 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CCDC162PA2VCL2 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC162PA2VCL2 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CCDC162PA2VCL2 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CCDC162PA2VCL2 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC162PA2VCL2 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC162PA2VCL2 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC162PA2VCL2 AC007322.1-201ENST00000426983 750 ntBASIC20.35■□□□□ 0.85
CCDC162PA2VCL2 RARRES2P4-201ENST00000514074 484 ntBASIC20.35■□□□□ 0.85
CCDC162PA2VCL2 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.35■□□□□ 0.85
CCDC162PA2VCL2 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC162PA2VCL2 AC231657.2-201ENST00000624556 255 ntBASIC20.35■□□□□ 0.85
CCDC162PA2VCL2 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.35■□□□□ 0.85
CCDC162PA2VCL2 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CCDC162PA2VCL2 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CCDC162PA2VCL2 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.35■□□□□ 0.85
CCDC162PA2VCL2 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC162PA2VCL2 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC162PA2VCL2 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC162PA2VCL2 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC162PA2VCL2 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC162PA2VCL2 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC162PA2VCL2 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CCDC162PA2VCL2 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.34■□□□□ 0.85
CCDC162PA2VCL2 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC162PA2VCL2 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC162PA2VCL2 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC162PA2VCL2 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC162PA2VCL2 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC162PA2VCL2 CYP2T1P-201ENST00000432607 1285 ntBASIC20.34■□□□□ 0.85
CCDC162PA2VCL2 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CCDC162PA2VCL2 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC162PA2VCL2 AC080038.1-201ENST00000611274 1154 ntBASIC20.34■□□□□ 0.85
CCDC162PA2VCL2 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC162PA2VCL2 CYP21A1P-202ENST00000354927 1481 ntBASIC20.34■□□□□ 0.85
CCDC162PA2VCL2 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
CCDC162PA2VCL2 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CCDC162PA2VCL2 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.34■□□□□ 0.85
CCDC162PA2VCL2 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC162PA2VCL2 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC162PA2VCL2 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.34■□□□□ 0.85
CCDC162PA2VCL2 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC162PA2VCL2 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.33■□□□□ 0.85
CCDC162PA2VCL2 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC162PA2VCL2 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC162PA2VCL2 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC162PA2VCL2 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.33■□□□□ 0.85
CCDC162PA2VCL2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC162PA2VCL2 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.33■□□□□ 0.85
CCDC162PA2VCL2 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC162PA2VCL2 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC162PA2VCL2 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms