Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
HFM1A2PYH4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC30.31■■■□□ 2.44
HFM1A2PYH4 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
HFM1A2PYH4 SOX15-203ENST00000570788 1093 ntBASIC30.31■■■□□ 2.44
HFM1A2PYH4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC30.31■■■□□ 2.44
HFM1A2PYH4 BID-203ENST00000399765 1879 ntTSL 2 BASIC30.31■■■□□ 2.44
HFM1A2PYH4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
HFM1A2PYH4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
HFM1A2PYH4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
HFM1A2PYH4 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC30.31■■■□□ 2.44
HFM1A2PYH4 PRORSD1P-201ENST00000295112 541 ntBASIC30.3■■■□□ 2.44
HFM1A2PYH4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
HFM1A2PYH4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC30.3■■■□□ 2.44
HFM1A2PYH4 AC098590.1-201ENST00000468126 897 ntBASIC30.3■■■□□ 2.44
HFM1A2PYH4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC30.3■■■□□ 2.44
HFM1A2PYH4 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC30.3■■■□□ 2.44
HFM1A2PYH4 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC30.3■■■□□ 2.44
HFM1A2PYH4 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC30.3■■■□□ 2.44
HFM1A2PYH4 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC30.3■■■□□ 2.44
HFM1A2PYH4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
HFM1A2PYH4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC30.3■■■□□ 2.44
HFM1A2PYH4 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
HFM1A2PYH4 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
HFM1A2PYH4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
HFM1A2PYH4 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
HFM1A2PYH4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC30.3■■■□□ 2.44
HFM1A2PYH4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC30.3■■■□□ 2.44
HFM1A2PYH4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC30.3■■■□□ 2.44
HFM1A2PYH4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
HFM1A2PYH4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
HFM1A2PYH4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC30.29■■■□□ 2.44
HFM1A2PYH4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
HFM1A2PYH4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
HFM1A2PYH4 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
HFM1A2PYH4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC30.29■■■□□ 2.44
HFM1A2PYH4 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
HFM1A2PYH4 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
HFM1A2PYH4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
HFM1A2PYH4 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
HFM1A2PYH4 AC005829.2-201ENST00000571422 1056 ntBASIC30.29■■■□□ 2.44
HFM1A2PYH4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
HFM1A2PYH4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
HFM1A2PYH4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC30.28■■■□□ 2.44
HFM1A2PYH4 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
HFM1A2PYH4 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC30.28■■■□□ 2.44
HFM1A2PYH4 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC30.28■■■□□ 2.44
HFM1A2PYH4 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
HFM1A2PYH4 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
HFM1A2PYH4 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
HFM1A2PYH4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
HFM1A2PYH4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
HFM1A2PYH4 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC30.28■■■□□ 2.44
HFM1A2PYH4 FAM201B-201ENST00000458407 597 ntBASIC30.28■■■□□ 2.44
HFM1A2PYH4 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
HFM1A2PYH4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC30.27■■■□□ 2.44
HFM1A2PYH4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC30.27■■■□□ 2.44
HFM1A2PYH4 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
HFM1A2PYH4 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
HFM1A2PYH4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC30.27■■■□□ 2.44
HFM1A2PYH4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC30.27■■■□□ 2.44
HFM1A2PYH4 OR2A1-AS1-207ENST00000486094 819 ntBASIC30.27■■■□□ 2.44
HFM1A2PYH4 UNC93B4-201ENST00000505679 747 ntBASIC30.27■■■□□ 2.44
HFM1A2PYH4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
HFM1A2PYH4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
HFM1A2PYH4 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
HFM1A2PYH4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
HFM1A2PYH4 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC30.26■■■□□ 2.43
HFM1A2PYH4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC30.26■■■□□ 2.43
HFM1A2PYH4 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
HFM1A2PYH4 GGT1-206ENST00000404223 952 ntTSL 2 BASIC30.26■■■□□ 2.43
HFM1A2PYH4 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC30.26■■■□□ 2.43
HFM1A2PYH4 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
HFM1A2PYH4 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
HFM1A2PYH4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
HFM1A2PYH4 AC007225.1-201ENST00000566331 1836 ntBASIC30.25■■■□□ 2.43
HFM1A2PYH4 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
HFM1A2PYH4 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
HFM1A2PYH4 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
HFM1A2PYH4 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
HFM1A2PYH4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC30.25■■■□□ 2.43
HFM1A2PYH4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC30.25■■■□□ 2.43
HFM1A2PYH4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC30.25■■■□□ 2.43
HFM1A2PYH4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC30.25■■■□□ 2.43
HFM1A2PYH4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
HFM1A2PYH4 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC30.25■■■□□ 2.43
HFM1A2PYH4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC30.25■■■□□ 2.43
HFM1A2PYH4 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC30.25■■■□□ 2.43
HFM1A2PYH4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
HFM1A2PYH4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC30.24■■■□□ 2.43
HFM1A2PYH4 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC30.24■■■□□ 2.43
HFM1A2PYH4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
HFM1A2PYH4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
HFM1A2PYH4 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC30.24■■■□□ 2.43
HFM1A2PYH4 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC30.24■■■□□ 2.43
HFM1A2PYH4 PALM-208ENST00000592155 2272 ntTSL 4 BASIC30.24■■■□□ 2.43
HFM1A2PYH4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
HFM1A2PYH4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC30.23■■■□□ 2.43
HFM1A2PYH4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
HFM1A2PYH4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
HFM1A2PYH4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC30.23■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms