Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.53■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.53■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.53■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.53■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.53■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.53■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 AC087633.2-202ENST00000565166 1439 ntBASIC18.52■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.52■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 AC093787.1-201ENST00000450396 207 ntBASIC18.52■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.52■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.51■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 MKRN4P-201ENST00000444706 1521 ntBASIC18.51■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.51■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 AC073210.2-201ENST00000430369 194 ntBASIC18.51■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 AC069152.1-201ENST00000438030 544 ntBASIC18.51■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.51■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.51■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 KRT8P36-201ENST00000489121 1440 ntBASIC18.5■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 AC010980.2-201ENST00000587099 1412 ntBASIC18.5■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.5■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.5■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.5■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 AL121603.2-201ENST00000557373 2117 ntBASIC18.5■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.5■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.49■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 MIPEPP3-201ENST00000412105 444 ntBASIC18.49■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.49■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.49■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.49■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.49■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 AC098934.4-201ENST00000564127 592 ntBASIC18.49■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.49■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 CYP2T3P-201ENST00000601990 817 ntBASIC18.49■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.49■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 AL356652.1-201ENST00000615962 565 ntBASIC18.49■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 AC133041.1-202ENST00000642053 222 ntBASIC18.49■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.49■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.49■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.49■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.48■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms