Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 USP17L11-202ENST00000613973 1677 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
SLC1A1P43005 USP17L17-202ENST00000614762 1677 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
SLC1A1P43005 USP17L19-202ENST00000615989 1677 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
SLC1A1P43005 USP17L13-202ENST00000616303 1677 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
SLC1A1P43005 USP17L18-202ENST00000619296 1677 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
SLC1A1P43005 USP17L25-202ENST00000621472 1677 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
SLC1A1P43005 USP17L22-202ENST00000622009 1677 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
SLC1A1P43005 USP17L24-202ENST00000622713 1677 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
SLC1A1P43005 AC008543.2-201ENST00000436907 1383 ntBASIC8.97□□□□□ -0.97
SLC1A1P43005 LCLAT1-201ENST00000309052 5060 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SLC1A1P43005 GPBP1L1-201ENST00000290795 3599 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
SLC1A1P43005 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SLC1A1P43005 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SLC1A1P43005 AC018647.1-201ENST00000432866 1414 ntTSL 5 BASIC8.97□□□□□ -0.97
SLC1A1P43005 AC022486.1-201ENST00000510613 1483 ntTSL 5 BASIC8.96□□□□□ -0.97
SLC1A1P43005 AL138831.3-201ENST00000623656 1458 ntBASIC8.96□□□□□ -0.97
SLC1A1P43005 GGA3-202ENST00000538886 3766 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
SLC1A1P43005 FAM217B-201ENST00000358293 5152 ntAPPRIS P2 TSL 2 BASIC8.96□□□□□ -0.97
SLC1A1P43005 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC8.96□□□□□ -0.97
SLC1A1P43005 ZMYND8-207ENST00000396281 5511 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.97
SLC1A1P43005 LINC00467-201ENST00000423222 3508 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
SLC1A1P43005 DLG2-229ENST00000531015 2892 ntTSL 2 BASIC8.96□□□□□ -0.97
SLC1A1P43005 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
SLC1A1P43005 BCAS1-202ENST00000395961 3303 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
SLC1A1P43005 MET-204ENST00000436117 2295 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
SLC1A1P43005 CPEB4-209ENST00000522336 1551 ntTSL 5 BASIC8.96□□□□□ -0.97
SLC1A1P43005 SOX9-AS1-217ENST00000623935 1563 ntTSL 5 BASIC8.96□□□□□ -0.97
SLC1A1P43005 KCNJ15-221ENST00000613499 3049 ntAPPRIS P1 TSL 4 BASIC8.96□□□□□ -0.97
SLC1A1P43005 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
SLC1A1P43005 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC8.96□□□□□ -0.97
SLC1A1P43005 INIP-201ENST00000374234 713 ntTSL 2 BASIC8.96□□□□□ -0.98
SLC1A1P43005 AL603650.1-201ENST00000412680 240 ntBASIC8.96□□□□□ -0.98
SLC1A1P43005 ZRANB2-AS2-203ENST00000415780 249 ntTSL 5 BASIC8.96□□□□□ -0.98
SLC1A1P43005 RPL15P1-201ENST00000439981 600 ntBASIC8.96□□□□□ -0.98
SLC1A1P43005 RN7SL754P-201ENST00000470784 266 ntBASIC8.96□□□□□ -0.98
SLC1A1P43005 RN7SL156P-201ENST00000480334 304 ntBASIC8.96□□□□□ -0.98
SLC1A1P43005 RN7SL800P-201ENST00000484823 280 ntBASIC8.96□□□□□ -0.98
SLC1A1P43005 SRD5A3-AS1-202ENST00000510637 926 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
SLC1A1P43005 AC008591.1-202ENST00000515569 462 ntTSL 2 BASIC8.96□□□□□ -0.98
SLC1A1P43005 BRIX1P1-201ENST00000521785 908 ntBASIC8.96□□□□□ -0.98
SLC1A1P43005 SLA-223ENST00000524345 1003 ntTSL 2 BASIC8.96□□□□□ -0.98
SLC1A1P43005 ZNF123P-201ENST00000531501 1196 ntBASIC8.96□□□□□ -0.98
SLC1A1P43005 AP001372.1-202ENST00000533008 344 ntTSL 3 BASIC8.96□□□□□ -0.98
SLC1A1P43005 FOXG1-AS1-201ENST00000546560 538 ntTSL 3 BASIC8.96□□□□□ -0.98
SLC1A1P43005 AP005202.3-201ENST00000582033 567 ntTSL 4 BASIC8.96□□□□□ -0.98
SLC1A1P43005 ZRANB2-AS2-206ENST00000583678 551 ntTSL 4 BASIC8.96□□□□□ -0.98
SLC1A1P43005 AC005838.2-201ENST00000584643 317 ntBASIC8.96□□□□□ -0.98
SLC1A1P43005 SATB1-AS1-212ENST00000596152 610 ntTSL 5 BASIC8.96□□□□□ -0.98
SLC1A1P43005 Metazoa_SRP.108-201ENST00000621610 300 ntBASIC8.96□□□□□ -0.98
SLC1A1P43005 AP000769.3-201ENST00000622944 536 ntTSL 3 BASIC8.96□□□□□ -0.98
SLC1A1P43005 AC010894.5-201ENST00000624428 951 ntBASIC8.96□□□□□ -0.98
SLC1A1P43005 ZNF410-225ENST00000639051 936 ntTSL 5 BASIC8.96□□□□□ -0.98
SLC1A1P43005 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
SLC1A1P43005 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
SLC1A1P43005 ZNF136-201ENST00000343979 3643 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
SLC1A1P43005 NNT-AS1-204ENST00000513560 4769 ntTSL 2 BASIC8.96□□□□□ -0.98
SLC1A1P43005 HMSD-201ENST00000408945 2101 ntAPPRIS P1 TSL 3 BASIC8.96□□□□□ -0.98
SLC1A1P43005 TREML2-201ENST00000483722 3302 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
SLC1A1P43005 ADGRE1-205ENST00000450315 2567 ntTSL 2 BASIC8.96□□□□□ -0.98
SLC1A1P43005 AC012360.3-201ENST00000610036 3449 ntBASIC8.96□□□□□ -0.98
SLC1A1P43005 DCLRE1C-205ENST00000378249 2246 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
SLC1A1P43005 DNAH10-209ENST00000614082 3484 ntTSL 5 BASIC8.96□□□□□ -0.98
SLC1A1P43005 CD46-206ENST00000360212 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
SLC1A1P43005 MAPK10-329ENST00000641555 2656 ntBASIC8.96□□□□□ -0.98
SLC1A1P43005 AC013470.2-202ENST00000635746 1895 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
SLC1A1P43005 RBMY1A1-201ENST00000303902 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
SLC1A1P43005 RBMY1D-203ENST00000418956 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
SLC1A1P43005 RBMS2-204ENST00000550726 1452 ntTSL 2 BASIC8.96□□□□□ -0.98
SLC1A1P43005 RBMY1B-203ENST00000619219 1491 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
SLC1A1P43005 NUDT4-206ENST00000549992 3607 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
SLC1A1P43005 CDH18-203ENST00000502796 2386 ntTSL 2 BASIC8.95□□□□□ -0.98
SLC1A1P43005 AC011632.1-202ENST00000518128 2810 ntTSL 2 BASIC8.95□□□□□ -0.98
SLC1A1P43005 AL049833.3-201ENST00000623920 3738 ntBASIC8.95□□□□□ -0.98
SLC1A1P43005 ZNF331-216ENST00000511593 1985 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
SLC1A1P43005 AC008817.1-201ENST00000504215 1562 ntBASIC8.95□□□□□ -0.98
SLC1A1P43005 ZNF45-206ENST00000615985 2912 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
SLC1A1P43005 SHQ1-203ENST00000463369 2065 ntTSL 2 BASIC8.95□□□□□ -0.98
SLC1A1P43005 SCYL2-211ENST00000635101 3948 ntTSL 5 BASIC8.95□□□□□ -0.98
SLC1A1P43005 C18orf32-203ENST00000613385 5395 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
SLC1A1P43005 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SLC1A1P43005 IMMT-201ENST00000254636 2613 ntTSL 5 BASIC8.95□□□□□ -0.98
SLC1A1P43005 SMARCA2-202ENST00000324954 1781 ntTSL 5 BASIC8.95□□□□□ -0.98
SLC1A1P43005 CPB1-208ENST00000491148 1773 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
SLC1A1P43005 REC114-201ENST00000331090 927 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
SLC1A1P43005 RN7SKP239-201ENST00000364814 295 ntBASIC8.95□□□□□ -0.98
SLC1A1P43005 LINC01687-202ENST00000419467 465 ntTSL 3 BASIC8.95□□□□□ -0.98
SLC1A1P43005 SNRPCP1-201ENST00000433292 458 ntBASIC8.95□□□□□ -0.98
SLC1A1P43005 AC012363.2-201ENST00000437837 555 ntTSL 4 BASIC8.95□□□□□ -0.98
SLC1A1P43005 RPL5P29-201ENST00000482972 894 ntBASIC8.95□□□□□ -0.98
SLC1A1P43005 AC103409.1-202ENST00000518416 577 ntTSL 4 BASIC8.95□□□□□ -0.98
SLC1A1P43005 AC021001.1-201ENST00000518703 987 ntBASIC8.95□□□□□ -0.98
SLC1A1P43005 PROSER3-207ENST00000537459 772 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
SLC1A1P43005 SCAND2P-204ENST00000541103 669 ntBASIC8.95□□□□□ -0.98
SLC1A1P43005 BANF2-205ENST00000545418 360 ntTSL 3 BASIC8.95□□□□□ -0.98
SLC1A1P43005 AC131391.1-201ENST00000565359 520 ntTSL 2 BASIC8.95□□□□□ -0.98
SLC1A1P43005 LINC01974-201ENST00000575126 494 ntTSL 3 BASIC8.95□□□□□ -0.98
SLC1A1P43005 MIR3680-2-201ENST00000578247 87 ntBASIC8.95□□□□□ -0.98
SLC1A1P43005 AC005722.3-201ENST00000580884 446 ntTSL 3 BASIC8.95□□□□□ -0.98
SLC1A1P43005 MIR3680-1-201ENST00000581433 87 ntBASIC8.95□□□□□ -0.98
SLC1A1P43005 ADAL-208ENST00000610420 974 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms