Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 LINC00945-201ENST00000453716 753 ntTSL 5 BASIC7.99□□□□□ -1.13
NPIPA3F8WFD2 HEPACAM2-204ENST00000453812 1869 ntAPPRIS ALT2 TSL 2 BASIC7.99□□□□□ -1.13
NPIPA3F8WFD2 AC009108.1-201ENST00000473913 796 ntBASIC7.99□□□□□ -1.13
NPIPA3F8WFD2 BRIX1P1-201ENST00000521785 908 ntBASIC7.99□□□□□ -1.13
NPIPA3F8WFD2 ATP5L-202ENST00000524422 720 ntTSL 3 BASIC7.99□□□□□ -1.13
NPIPA3F8WFD2 ZNF559-203ENST00000585352 967 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
NPIPA3F8WFD2 AC011442.1-201ENST00000587831 366 ntTSL 5 BASIC7.99□□□□□ -1.13
NPIPA3F8WFD2 ZNF615-206ENST00000597747 704 ntTSL 5 BASIC7.99□□□□□ -1.13
NPIPA3F8WFD2 AP001425.1-202ENST00000605450 1063 ntBASIC7.99□□□□□ -1.13
NPIPA3F8WFD2 OR10AE1P-201ENST00000606962 1029 ntBASIC7.99□□□□□ -1.13
NPIPA3F8WFD2 AC002094.4-201ENST00000613598 307 ntBASIC7.99□□□□□ -1.13
NPIPA3F8WFD2 AC025283.2-203ENST00000618352 2905 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
NPIPA3F8WFD2 Metazoa_SRP.132-201ENST00000619251 285 ntBASIC7.99□□□□□ -1.13
NPIPA3F8WFD2 Metazoa_SRP.176-201ENST00000619772 282 ntBASIC7.99□□□□□ -1.13
NPIPA3F8WFD2 Z98752.3-201ENST00000621802 566 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
NPIPA3F8WFD2 CU638689.2-201ENST00000623809 818 ntBASIC7.99□□□□□ -1.13
NPIPA3F8WFD2 TOP1-201ENST00000361337 3738 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
NPIPA3F8WFD2 C1orf116-202ENST00000461135 3142 ntTSL 2 BASIC7.99□□□□□ -1.13
NPIPA3F8WFD2 TDP1-202ENST00000393452 2370 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
NPIPA3F8WFD2 LINC01719-204ENST00000611275 2054 ntTSL 5 BASIC7.99□□□□□ -1.13
NPIPA3F8WFD2 ZEB2-201ENST00000303660 3913 ntAPPRIS ALT1 TSL 1 (best) BASIC7.99□□□□□ -1.13
NPIPA3F8WFD2 ZNF146-202ENST00000456324 3780 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
NPIPA3F8WFD2 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
NPIPA3F8WFD2 ADGRF4-201ENST00000283303 3162 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
NPIPA3F8WFD2 NR1I3-205ENST00000367983 1473 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
NPIPA3F8WFD2 SLC11A2-212ENST00000547688 2401 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
NPIPA3F8WFD2 STARD4-212ENST00000512160 3500 ntTSL 2 BASIC7.99□□□□□ -1.13
NPIPA3F8WFD2 CDC25C-201ENST00000323760 2128 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
NPIPA3F8WFD2 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
NPIPA3F8WFD2 AC104806.2-201ENST00000502400 1991 ntTSL 2 BASIC7.99□□□□□ -1.13
NPIPA3F8WFD2 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC7.99□□□□□ -1.13
NPIPA3F8WFD2 WWC1-209ENST00000521089 3562 ntAPPRIS ALT1 TSL 2 BASIC7.99□□□□□ -1.13
NPIPA3F8WFD2 FHL1-201ENST00000345434 2458 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 MSH4-201ENST00000263187 3266 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 CELF1-205ENST00000395292 2191 ntAPPRIS P4 TSL 1 (best) BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 TARS-202ENST00000455217 2523 ntTSL 2 BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 LINC02035-201ENST00000610128 5476 ntBASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 NVL-216ENST00000482491 3003 ntTSL 5 BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 MASP1-202ENST00000296280 4015 ntAPPRIS P4 TSL 1 (best) BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 ZNF248-208ENST00000611278 4204 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 SAMD8-201ENST00000372687 6935 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 HAUS2-201ENST00000260372 3949 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 CD164-203ENST00000324953 2936 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 AC010320.4-201ENST00000594379 1905 ntTSL 2 BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 AC007126.1-201ENST00000508202 4781 ntBASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 TRIM49D2-201ENST00000526396 1411 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 TBC1D31-202ENST00000327098 2985 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 PFDN5-203ENST00000351500 478 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 PLGLB1-201ENST00000355705 1169 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 GSTA4-202ENST00000370960 859 ntTSL 3 BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 RPL24-201ENST00000394077 623 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 AL645937.5-202ENST00000415595 944 ntBASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 AC004830.1-201ENST00000420449 285 ntTSL 5 BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 AL117378.1-202ENST00000421310 601 ntTSL 5 BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 LINC00607-204ENST00000423530 2104 ntTSL 2 BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 AC114492.1-201ENST00000434936 454 ntBASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 LINC02093-201ENST00000440522 485 ntTSL 5 BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 AL391987.3-201ENST00000441101 719 ntTSL 5 BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 AL139237.1-201ENST00000446107 513 ntTSL 2 BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 ITPKB-AS1-201ENST00000453525 538 ntTSL 2 BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 AC026787.1-201ENST00000504182 420 ntTSL 5 BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 GAPDHP35-201ENST00000513369 976 ntBASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 HNRNPKP3-202ENST00000533565 589 ntTSL 4 BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 AC060814.2-201ENST00000556905 1089 ntBASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 AC009120.2-203ENST00000565313 539 ntTSL 3 BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 RPL17-212ENST00000581373 584 ntTSL 2 BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 ZNF286A-214ENST00000581529 560 ntTSL 4 BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 AC005180.1-201ENST00000591137 587 ntTSL 4 BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 AC008734.2-201ENST00000595277 477 ntBASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 AC233702.11-201ENST00000598588 333 ntBASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 AL844908.1-201ENST00000609953 652 ntBASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 MGST2-207ENST00000616265 1278 ntAPPRIS P1 TSL 4 BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 AC245505.3-201ENST00000616788 358 ntBASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 MIR6737-201ENST00000617385 70 ntBASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 RN7SL575P-201ENST00000620774 299 ntBASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 AC234791.1-201ENST00000620830 1203 ntBASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 MIR6754-201ENST00000621121 66 ntBASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 AC133485.6-201ENST00000624045 688 ntBASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 AC124319.2-201ENST00000575034 3651 ntTSL 2 BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 HBS1L-205ENST00000367837 7163 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 CYP2C18-202ENST00000339022 1471 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 CNIH4-202ENST00000366857 3963 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 SSX2B-204ENST00000616191 1344 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 ERVMER34-1-202ENST00000443173 3830 ntAPPRIS P1 TSL 3 BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 ZNF233-201ENST00000391958 2784 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 SSBP2-205ENST00000505980 1521 ntTSL 2 BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 LRTOMT-203ENST00000324866 2402 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 ABCB1-211ENST00000622132 4778 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 ZSCAN9-204ENST00000527436 2062 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 DIAPH3-202ENST00000377908 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 ANKRD20A11P-206ENST00000451663 3717 ntBASIC7.98□□□□□ -1.13
NPIPA3F8WFD2 RPS6-204ENST00000380394 1387 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
NPIPA3F8WFD2 FAM122B-206ENST00000486347 1381 ntAPPRIS P3 TSL 2 BASIC7.97□□□□□ -1.13
NPIPA3F8WFD2 ZNF23-202ENST00000358700 2692 ntTSL 5 BASIC7.97□□□□□ -1.13
NPIPA3F8WFD2 EXOSC2-203ENST00000372352 1957 ntTSL 5 BASIC7.97□□□□□ -1.13
NPIPA3F8WFD2 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms