Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 MYLK-220ENST00000578202 1447 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
UBE4BO95155 AL354993.1-201ENST00000436286 3280 ntTSL 4 BASIC9.56□□□□□ -0.88
UBE4BO95155 NLRC4-201ENST00000342905 1362 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
UBE4BO95155 AL049636.1-201ENST00000455736 1357 ntBASIC9.56□□□□□ -0.88
UBE4BO95155 KPNB1-202ENST00000535458 3163 ntTSL 2 BASIC9.56□□□□□ -0.88
UBE4BO95155 PRCP-202ENST00000393399 2120 ntTSL 2 BASIC9.56□□□□□ -0.88
UBE4BO95155 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC9.56□□□□□ -0.88
UBE4BO95155 SNORA58.1-201ENST00000364133 136 ntBASIC9.56□□□□□ -0.88
UBE4BO95155 ITGB3BP-202ENST00000371092 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
UBE4BO95155 TRGV1-201ENST00000390348 465 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
UBE4BO95155 TRAV20-201ENST00000390448 406 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
UBE4BO95155 FCAR-207ENST00000391725 830 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
UBE4BO95155 AC131097.2-201ENST00000404031 595 ntAPPRIS ALT2 TSL 3 BASIC9.56□□□□□ -0.88
UBE4BO95155 AL049734.1-201ENST00000422384 608 ntBASIC9.56□□□□□ -0.88
UBE4BO95155 AC090044.1-201ENST00000423193 497 ntTSL 2 BASIC9.56□□□□□ -0.88
UBE4BO95155 MDC1-AS1-201ENST00000442150 738 ntTSL 3 BASIC9.56□□□□□ -0.88
UBE4BO95155 USP12-AS2-201ENST00000452222 279 ntTSL 3 BASIC9.56□□□□□ -0.88
UBE4BO95155 OSBPL10-AS1-207ENST00000455961 411 ntTSL 2 BASIC9.56□□□□□ -0.88
UBE4BO95155 LINC02160-201ENST00000503577 517 ntTSL 3 BASIC9.56□□□□□ -0.88
UBE4BO95155 AP002026.1-205ENST00000509295 915 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
UBE4BO95155 AP002505.1-201ENST00000592655 228 ntTSL 5 BASIC9.56□□□□□ -0.88
UBE4BO95155 HMGN2P46-208ENST00000598619 490 ntBASIC9.56□□□□□ -0.88
UBE4BO95155 ADAL-208ENST00000610420 974 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
UBE4BO95155 AL121785.1-201ENST00000624745 708 ntBASIC9.56□□□□□ -0.88
UBE4BO95155 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
UBE4BO95155 AP003352.1-201ENST00000501016 1989 ntTSL 5 BASIC9.55□□□□□ -0.88
UBE4BO95155 AC010487.3-201ENST00000634278 1966 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
UBE4BO95155 PIGN-201ENST00000357637 4723 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
UBE4BO95155 THBS3-210ENST00000541576 3200 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
UBE4BO95155 SLC22A24-201ENST00000326192 1663 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
UBE4BO95155 PDLIM5-222ENST00000615540 6219 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
UBE4BO95155 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC9.55□□□□□ -0.88
UBE4BO95155 TYW1-201ENST00000359626 3348 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
UBE4BO95155 CD302-202ENST00000429078 3803 ntTSL 2 BASIC9.55□□□□□ -0.88
UBE4BO95155 PDCD6IP-201ENST00000307296 6161 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
UBE4BO95155 POGZ-203ENST00000368863 6054 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
UBE4BO95155 DHFR-202ENST00000504396 1447 ntTSL 2 BASIC9.55□□□□□ -0.88
UBE4BO95155 USP46-207ENST00000508499 1419 ntTSL 2 BASIC9.55□□□□□ -0.88
UBE4BO95155 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
UBE4BO95155 SH3YL1-229ENST00000626873 1973 ntTSL 5 BASIC9.55□□□□□ -0.88
UBE4BO95155 WISP3-202ENST00000361714 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
UBE4BO95155 PTK2B-201ENST00000346049 4147 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
UBE4BO95155 L3MBTL3-203ENST00000368139 4148 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
UBE4BO95155 AL731563.3-201ENST00000608005 3005 ntTSL 2 BASIC9.55□□□□□ -0.88
UBE4BO95155 TANC2-201ENST00000389520 6404 ntTSL 5 BASIC9.55□□□□□ -0.88
UBE4BO95155 KRTAP9-9-201ENST00000394008 981 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
UBE4BO95155 TGFB2-AS1-201ENST00000414452 557 ntTSL 3 BASIC9.55□□□□□ -0.88
UBE4BO95155 ZRANB2-AS2-203ENST00000415780 249 ntTSL 5 BASIC9.55□□□□□ -0.88
UBE4BO95155 AC007359.1-201ENST00000417910 745 ntTSL 3 BASIC9.55□□□□□ -0.88
UBE4BO95155 HSPB1P1-201ENST00000423240 256 ntBASIC9.55□□□□□ -0.88
UBE4BO95155 PRSS37-203ENST00000438520 826 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
UBE4BO95155 AC008175.1-202ENST00000439653 745 ntTSL 3 BASIC9.55□□□□□ -0.88
UBE4BO95155 GRPEL2P3-201ENST00000448626 640 ntBASIC9.55□□□□□ -0.88
UBE4BO95155 HNRNPA1P31-201ENST00000448627 970 ntBASIC9.55□□□□□ -0.88
UBE4BO95155 AC119428.2-201ENST00000449958 850 ntTSL 2 BASIC9.55□□□□□ -0.88
UBE4BO95155 AC092634.4-203ENST00000451395 448 ntBASIC9.55□□□□□ -0.88
UBE4BO95155 AL357874.2-201ENST00000457044 679 ntTSL 3 BASIC9.55□□□□□ -0.88
UBE4BO95155 RN7SL236P-201ENST00000484759 284 ntBASIC9.55□□□□□ -0.88
UBE4BO95155 AC026415.1-201ENST00000505404 471 ntTSL 5 BASIC9.55□□□□□ -0.88
UBE4BO95155 RN7SKP52-201ENST00000516219 250 ntBASIC9.55□□□□□ -0.88
UBE4BO95155 AC022730.3-201ENST00000521051 736 ntTSL 5 BASIC9.55□□□□□ -0.88
UBE4BO95155 AC009652.1-201ENST00000528326 648 ntTSL 5 BASIC9.55□□□□□ -0.88
UBE4BO95155 WARSP1-201ENST00000533936 454 ntBASIC9.55□□□□□ -0.88
UBE4BO95155 AC243972.2-201ENST00000541653 991 ntBASIC9.55□□□□□ -0.88
UBE4BO95155 AC078865.1-201ENST00000547174 562 ntTSL 4 BASIC9.55□□□□□ -0.88
UBE4BO95155 LINC02327-206ENST00000551588 885 ntTSL 5 BASIC9.55□□□□□ -0.88
UBE4BO95155 AC087633.1-201ENST00000554649 715 ntTSL 3 BASIC9.55□□□□□ -0.88
UBE4BO95155 AC012186.1-201ENST00000566702 398 ntBASIC9.55□□□□□ -0.88
UBE4BO95155 AC005722.3-201ENST00000580884 446 ntTSL 3 BASIC9.55□□□□□ -0.88
UBE4BO95155 MIR3972-201ENST00000582732 87 ntBASIC9.55□□□□□ -0.88
UBE4BO95155 LINC00635-210ENST00000600240 714 ntTSL 5 BASIC9.55□□□□□ -0.88
UBE4BO95155 AL133351.4-201ENST00000604204 631 ntBASIC9.55□□□□□ -0.88
UBE4BO95155 CDC37L1-AS1-201ENST00000607997 463 ntTSL 5 BASIC9.55□□□□□ -0.88
UBE4BO95155 uc_338.2-201ENST00000612963 182 ntBASIC9.55□□□□□ -0.88
UBE4BO95155 uc_338.3-201ENST00000613268 181 ntBASIC9.55□□□□□ -0.88
UBE4BO95155 AL591926.6-201ENST00000617375 415 ntBASIC9.55□□□□□ -0.88
UBE4BO95155 AL109804.1-201ENST00000620777 562 ntTSL 5 BASIC9.55□□□□□ -0.88
UBE4BO95155 MIR7113-201ENST00000621222 59 ntBASIC9.55□□□□□ -0.88
UBE4BO95155 AL627171.2-201ENST00000635177 1090 ntTSL 5 BASIC9.55□□□□□ -0.88
UBE4BO95155 PATE2-201ENST00000358524 1657 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBE4BO95155 NFIA-212ENST00000485903 1674 ntTSL 5 BASIC9.54□□□□□ -0.88
UBE4BO95155 AC113189.6-201ENST00000636696 3591 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
UBE4BO95155 LINC02357-201ENST00000637313 1622 ntTSL 5 BASIC9.54□□□□□ -0.88
UBE4BO95155 PRNT-203ENST00000423718 2096 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBE4BO95155 ACTR2-201ENST00000260641 3861 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBE4BO95155 CPA6-201ENST00000297770 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBE4BO95155 RASSF6-201ENST00000307439 5994 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBE4BO95155 LYZ-201ENST00000261267 1530 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBE4BO95155 MTF2-201ENST00000370298 4125 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBE4BO95155 HRH2-204ENST00000636584 4067 ntTSL 3 BASIC9.54□□□□□ -0.88
UBE4BO95155 FBXW11P1-201ENST00000393804 1474 ntBASIC9.54□□□□□ -0.88
UBE4BO95155 CD226-207ENST00000582621 1458 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBE4BO95155 HTR2A-201ENST00000378688 4835 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBE4BO95155 BTN2A3P-201ENST00000377662 1836 ntBASIC9.54□□□□□ -0.88
UBE4BO95155 SPATA13-204ENST00000399949 3026 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
UBE4BO95155 SIRT5-201ENST00000359782 3797 ntTSL 2 BASIC9.54□□□□□ -0.88
UBE4BO95155 PCAT18-201ENST00000579458 2598 ntTSL 2 BASIC9.54□□□□□ -0.88
UBE4BO95155 SLC14A1-202ENST00000402943 1390 ntTSL 2 BASIC9.54□□□□□ -0.88
UBE4BO95155 OR4D9-202ENST00000641278 6063 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
UBE4BO95155 GBAP1-202ENST00000459805 2922 ntTSL 5 BASIC9.54□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 230.5 ms