Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
R3HCC1Q9Y3T6 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
R3HCC1Q9Y3T6 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
R3HCC1Q9Y3T6 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
R3HCC1Q9Y3T6 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC23.2■■□□□ 1.31
R3HCC1Q9Y3T6 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
R3HCC1Q9Y3T6 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
R3HCC1Q9Y3T6 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
R3HCC1Q9Y3T6 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
R3HCC1Q9Y3T6 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
R3HCC1Q9Y3T6 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
R3HCC1Q9Y3T6 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
R3HCC1Q9Y3T6 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
R3HCC1Q9Y3T6 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
R3HCC1Q9Y3T6 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
R3HCC1Q9Y3T6 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
R3HCC1Q9Y3T6 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC23.2■■□□□ 1.3
R3HCC1Q9Y3T6 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
R3HCC1Q9Y3T6 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
R3HCC1Q9Y3T6 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC23.2■■□□□ 1.3
R3HCC1Q9Y3T6 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC23.2■■□□□ 1.3
R3HCC1Q9Y3T6 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
R3HCC1Q9Y3T6 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC23.2■■□□□ 1.3
R3HCC1Q9Y3T6 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
R3HCC1Q9Y3T6 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
R3HCC1Q9Y3T6 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
R3HCC1Q9Y3T6 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC23.2■■□□□ 1.3
R3HCC1Q9Y3T6 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
R3HCC1Q9Y3T6 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC23.2■■□□□ 1.3
R3HCC1Q9Y3T6 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC23.2■■□□□ 1.3
R3HCC1Q9Y3T6 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
R3HCC1Q9Y3T6 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC23.2■■□□□ 1.3
R3HCC1Q9Y3T6 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
R3HCC1Q9Y3T6 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
R3HCC1Q9Y3T6 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
R3HCC1Q9Y3T6 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
R3HCC1Q9Y3T6 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC23.19■■□□□ 1.3
R3HCC1Q9Y3T6 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
R3HCC1Q9Y3T6 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
R3HCC1Q9Y3T6 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23.19■■□□□ 1.3
R3HCC1Q9Y3T6 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC23.19■■□□□ 1.3
R3HCC1Q9Y3T6 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.19■■□□□ 1.3
R3HCC1Q9Y3T6 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.19■■□□□ 1.3
R3HCC1Q9Y3T6 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.19■■□□□ 1.3
R3HCC1Q9Y3T6 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
R3HCC1Q9Y3T6 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
R3HCC1Q9Y3T6 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC23.19■■□□□ 1.3
R3HCC1Q9Y3T6 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
R3HCC1Q9Y3T6 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC23.19■■□□□ 1.3
R3HCC1Q9Y3T6 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
R3HCC1Q9Y3T6 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
R3HCC1Q9Y3T6 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
R3HCC1Q9Y3T6 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
R3HCC1Q9Y3T6 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC23.18■■□□□ 1.3
R3HCC1Q9Y3T6 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
R3HCC1Q9Y3T6 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
R3HCC1Q9Y3T6 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
R3HCC1Q9Y3T6 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC23.18■■□□□ 1.3
R3HCC1Q9Y3T6 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.18■■□□□ 1.3
R3HCC1Q9Y3T6 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
R3HCC1Q9Y3T6 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC23.18■■□□□ 1.3
R3HCC1Q9Y3T6 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
R3HCC1Q9Y3T6 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
R3HCC1Q9Y3T6 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
R3HCC1Q9Y3T6 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.18■■□□□ 1.3
R3HCC1Q9Y3T6 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC23.17■■□□□ 1.3
R3HCC1Q9Y3T6 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC23.17■■□□□ 1.3
R3HCC1Q9Y3T6 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
R3HCC1Q9Y3T6 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
R3HCC1Q9Y3T6 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23.17■■□□□ 1.3
R3HCC1Q9Y3T6 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
R3HCC1Q9Y3T6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.17■■□□□ 1.3
R3HCC1Q9Y3T6 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
R3HCC1Q9Y3T6 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
R3HCC1Q9Y3T6 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
R3HCC1Q9Y3T6 AC112907.3-201ENST00000577781 2400 ntBASIC23.17■■□□□ 1.3
R3HCC1Q9Y3T6 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
R3HCC1Q9Y3T6 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
R3HCC1Q9Y3T6 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
R3HCC1Q9Y3T6 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
R3HCC1Q9Y3T6 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
R3HCC1Q9Y3T6 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
R3HCC1Q9Y3T6 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
R3HCC1Q9Y3T6 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC23.16■■□□□ 1.3
R3HCC1Q9Y3T6 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC23.16■■□□□ 1.3
R3HCC1Q9Y3T6 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC23.16■■□□□ 1.3
R3HCC1Q9Y3T6 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC23.16■■□□□ 1.3
R3HCC1Q9Y3T6 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC23.16■■□□□ 1.3
R3HCC1Q9Y3T6 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
R3HCC1Q9Y3T6 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC23.16■■□□□ 1.3
R3HCC1Q9Y3T6 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
R3HCC1Q9Y3T6 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
R3HCC1Q9Y3T6 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
R3HCC1Q9Y3T6 AC004408.2-201ENST00000623613 2777 ntBASIC23.15■■□□□ 1.3
R3HCC1Q9Y3T6 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
R3HCC1Q9Y3T6 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
R3HCC1Q9Y3T6 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC23.15■■□□□ 1.3
R3HCC1Q9Y3T6 AC026271.2-201ENST00000428091 497 ntBASIC23.15■■□□□ 1.3
R3HCC1Q9Y3T6 AC034268.1-201ENST00000441047 882 ntBASIC23.15■■□□□ 1.3
R3HCC1Q9Y3T6 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms