Protein–RNA interactions for Protein: Q9Y3B2

EXOSC1, Exosome complex component CSL4, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1Q9Y3B2 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.23■□□□□ 0.51
EXOSC1Q9Y3B2 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.23■□□□□ 0.51
EXOSC1Q9Y3B2 AC053503.5-201ENST00000601508 636 ntBASIC18.23■□□□□ 0.51
EXOSC1Q9Y3B2 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.23■□□□□ 0.51
EXOSC1Q9Y3B2 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.23■□□□□ 0.51
EXOSC1Q9Y3B2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
EXOSC1Q9Y3B2 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
EXOSC1Q9Y3B2 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
EXOSC1Q9Y3B2 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
EXOSC1Q9Y3B2 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.22■□□□□ 0.51
EXOSC1Q9Y3B2 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
EXOSC1Q9Y3B2 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
EXOSC1Q9Y3B2 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
EXOSC1Q9Y3B2 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
EXOSC1Q9Y3B2 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.22■□□□□ 0.51
EXOSC1Q9Y3B2 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
EXOSC1Q9Y3B2 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
EXOSC1Q9Y3B2 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
EXOSC1Q9Y3B2 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.22■□□□□ 0.51
EXOSC1Q9Y3B2 AC125437.2-201ENST00000625180 2167 ntBASIC18.22■□□□□ 0.51
EXOSC1Q9Y3B2 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
EXOSC1Q9Y3B2 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
EXOSC1Q9Y3B2 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EXOSC1Q9Y3B2 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EXOSC1Q9Y3B2 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
EXOSC1Q9Y3B2 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EXOSC1Q9Y3B2 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
EXOSC1Q9Y3B2 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
EXOSC1Q9Y3B2 IGHV3-19-201ENST00000521488 291 ntBASIC18.21■□□□□ 0.51
EXOSC1Q9Y3B2 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.21■□□□□ 0.51
EXOSC1Q9Y3B2 EEF1DP3-203ENST00000566025 782 ntBASIC18.21■□□□□ 0.51
EXOSC1Q9Y3B2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EXOSC1Q9Y3B2 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EXOSC1Q9Y3B2 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.21■□□□□ 0.51
EXOSC1Q9Y3B2 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.21■□□□□ 0.51
EXOSC1Q9Y3B2 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
EXOSC1Q9Y3B2 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.21■□□□□ 0.51
EXOSC1Q9Y3B2 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.21■□□□□ 0.51
EXOSC1Q9Y3B2 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EXOSC1Q9Y3B2 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
EXOSC1Q9Y3B2 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
EXOSC1Q9Y3B2 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
EXOSC1Q9Y3B2 AC061975.6-201ENST00000579045 1553 ntBASIC18.21■□□□□ 0.51
EXOSC1Q9Y3B2 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
EXOSC1Q9Y3B2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.21■□□□□ 0.51
EXOSC1Q9Y3B2 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
EXOSC1Q9Y3B2 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
EXOSC1Q9Y3B2 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
EXOSC1Q9Y3B2 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.2■□□□□ 0.5
EXOSC1Q9Y3B2 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
EXOSC1Q9Y3B2 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.2■□□□□ 0.5
EXOSC1Q9Y3B2 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.2■□□□□ 0.5
EXOSC1Q9Y3B2 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
EXOSC1Q9Y3B2 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.2■□□□□ 0.5
EXOSC1Q9Y3B2 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
EXOSC1Q9Y3B2 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
EXOSC1Q9Y3B2 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
EXOSC1Q9Y3B2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
EXOSC1Q9Y3B2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
EXOSC1Q9Y3B2 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
EXOSC1Q9Y3B2 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.2■□□□□ 0.5
EXOSC1Q9Y3B2 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.2■□□□□ 0.5
EXOSC1Q9Y3B2 GUSBP5-201ENST00000418136 578 ntBASIC18.2■□□□□ 0.5
EXOSC1Q9Y3B2 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.2■□□□□ 0.5
EXOSC1Q9Y3B2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.2■□□□□ 0.5
EXOSC1Q9Y3B2 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.2■□□□□ 0.5
EXOSC1Q9Y3B2 AL158211.5-201ENST00000623583 2518 ntBASIC18.2■□□□□ 0.5
EXOSC1Q9Y3B2 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
EXOSC1Q9Y3B2 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
EXOSC1Q9Y3B2 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
EXOSC1Q9Y3B2 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
EXOSC1Q9Y3B2 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
EXOSC1Q9Y3B2 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
EXOSC1Q9Y3B2 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
EXOSC1Q9Y3B2 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
EXOSC1Q9Y3B2 AC098818.2-201ENST00000564925 2320 ntBASIC18.2■□□□□ 0.5
EXOSC1Q9Y3B2 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
EXOSC1Q9Y3B2 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
EXOSC1Q9Y3B2 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
EXOSC1Q9Y3B2 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EXOSC1Q9Y3B2 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EXOSC1Q9Y3B2 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EXOSC1Q9Y3B2 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.19■□□□□ 0.5
EXOSC1Q9Y3B2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EXOSC1Q9Y3B2 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EXOSC1Q9Y3B2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
EXOSC1Q9Y3B2 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
EXOSC1Q9Y3B2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.19■□□□□ 0.5
EXOSC1Q9Y3B2 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.19■□□□□ 0.5
EXOSC1Q9Y3B2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.19■□□□□ 0.5
EXOSC1Q9Y3B2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.19■□□□□ 0.5
EXOSC1Q9Y3B2 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.19■□□□□ 0.5
EXOSC1Q9Y3B2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.19■□□□□ 0.5
EXOSC1Q9Y3B2 MIR4466-201ENST00000606121 54 ntBASIC18.19■□□□□ 0.5
EXOSC1Q9Y3B2 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.19■□□□□ 0.5
EXOSC1Q9Y3B2 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.19■□□□□ 0.5
EXOSC1Q9Y3B2 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.19■□□□□ 0.5
EXOSC1Q9Y3B2 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EXOSC1Q9Y3B2 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
EXOSC1Q9Y3B2 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms