Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RPH3AQ9Y2J0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPH3AQ9Y2J0 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPH3AQ9Y2J0 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RPH3AQ9Y2J0 AC010980.2-201ENST00000587099 1412 ntBASIC18.66■□□□□ 0.58
RPH3AQ9Y2J0 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.65■□□□□ 0.58
RPH3AQ9Y2J0 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
RPH3AQ9Y2J0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RPH3AQ9Y2J0 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RPH3AQ9Y2J0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPH3AQ9Y2J0 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPH3AQ9Y2J0 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.65■□□□□ 0.58
RPH3AQ9Y2J0 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPH3AQ9Y2J0 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RPH3AQ9Y2J0 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPH3AQ9Y2J0 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RPH3AQ9Y2J0 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RPH3AQ9Y2J0 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.65■□□□□ 0.58
RPH3AQ9Y2J0 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.65■□□□□ 0.58
RPH3AQ9Y2J0 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.65■□□□□ 0.58
RPH3AQ9Y2J0 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RPH3AQ9Y2J0 AL138781.1-201ENST00000566567 1274 ntBASIC18.65■□□□□ 0.58
RPH3AQ9Y2J0 AC142086.2-201ENST00000569753 217 ntBASIC18.65■□□□□ 0.58
RPH3AQ9Y2J0 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPH3AQ9Y2J0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPH3AQ9Y2J0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RPH3AQ9Y2J0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RPH3AQ9Y2J0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPH3AQ9Y2J0 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RPH3AQ9Y2J0 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPH3AQ9Y2J0 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.65■□□□□ 0.58
RPH3AQ9Y2J0 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPH3AQ9Y2J0 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPH3AQ9Y2J0 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPH3AQ9Y2J0 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.58
RPH3AQ9Y2J0 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RPH3AQ9Y2J0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
RPH3AQ9Y2J0 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RPH3AQ9Y2J0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
RPH3AQ9Y2J0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RPH3AQ9Y2J0 AC121338.2-201ENST00000622535 1744 ntBASIC18.64■□□□□ 0.57
RPH3AQ9Y2J0 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RPH3AQ9Y2J0 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RPH3AQ9Y2J0 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RPH3AQ9Y2J0 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
RPH3AQ9Y2J0 AL512625.2-201ENST00000417533 625 ntBASIC18.64■□□□□ 0.57
RPH3AQ9Y2J0 BX276092.2-201ENST00000417668 665 ntBASIC18.64■□□□□ 0.57
RPH3AQ9Y2J0 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RPH3AQ9Y2J0 AL355472.2-201ENST00000422958 438 ntBASIC18.64■□□□□ 0.57
RPH3AQ9Y2J0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.64■□□□□ 0.57
RPH3AQ9Y2J0 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RPH3AQ9Y2J0 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.64■□□□□ 0.57
RPH3AQ9Y2J0 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.64■□□□□ 0.57
RPH3AQ9Y2J0 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
RPH3AQ9Y2J0 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RPH3AQ9Y2J0 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
RPH3AQ9Y2J0 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RPH3AQ9Y2J0 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RPH3AQ9Y2J0 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
RPH3AQ9Y2J0 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RPH3AQ9Y2J0 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RPH3AQ9Y2J0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RPH3AQ9Y2J0 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
RPH3AQ9Y2J0 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.63■□□□□ 0.57
RPH3AQ9Y2J0 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.63■□□□□ 0.57
RPH3AQ9Y2J0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPH3AQ9Y2J0 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPH3AQ9Y2J0 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RPH3AQ9Y2J0 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RPH3AQ9Y2J0 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.63■□□□□ 0.57
RPH3AQ9Y2J0 MIPEPP3-201ENST00000412105 444 ntBASIC18.63■□□□□ 0.57
RPH3AQ9Y2J0 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.63■□□□□ 0.57
RPH3AQ9Y2J0 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.63■□□□□ 0.57
RPH3AQ9Y2J0 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RPH3AQ9Y2J0 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPH3AQ9Y2J0 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPH3AQ9Y2J0 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RPH3AQ9Y2J0 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RPH3AQ9Y2J0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.62■□□□□ 0.57
RPH3AQ9Y2J0 AC011484.1-201ENST00000377652 1995 ntBASIC18.62■□□□□ 0.57
RPH3AQ9Y2J0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.62■□□□□ 0.57
RPH3AQ9Y2J0 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPH3AQ9Y2J0 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.62■□□□□ 0.57
RPH3AQ9Y2J0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPH3AQ9Y2J0 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPH3AQ9Y2J0 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPH3AQ9Y2J0 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPH3AQ9Y2J0 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.62■□□□□ 0.57
RPH3AQ9Y2J0 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.62■□□□□ 0.57
RPH3AQ9Y2J0 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.62■□□□□ 0.57
RPH3AQ9Y2J0 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.62■□□□□ 0.57
RPH3AQ9Y2J0 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.62■□□□□ 0.57
RPH3AQ9Y2J0 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.62■□□□□ 0.57
RPH3AQ9Y2J0 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.62■□□□□ 0.57
RPH3AQ9Y2J0 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RPH3AQ9Y2J0 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RPH3AQ9Y2J0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.62■□□□□ 0.57
RPH3AQ9Y2J0 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.62■□□□□ 0.57
RPH3AQ9Y2J0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPH3AQ9Y2J0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms