Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC30.62■■■□□ 2.49
SHANK2Q9UPX8 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
SHANK2Q9UPX8 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC30.62■■■□□ 2.49
SHANK2Q9UPX8 HES2-206ENST00000489730 730 ntTSL 2 BASIC30.62■■■□□ 2.49
SHANK2Q9UPX8 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC30.62■■■□□ 2.49
SHANK2Q9UPX8 REXO1L12P-201ENST00000622156 912 ntBASIC30.62■■■□□ 2.49
SHANK2Q9UPX8 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
SHANK2Q9UPX8 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
SHANK2Q9UPX8 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
SHANK2Q9UPX8 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
SHANK2Q9UPX8 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
SHANK2Q9UPX8 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
SHANK2Q9UPX8 SNORA78-201ENST00000459373 127 ntBASIC30.61■■■□□ 2.49
SHANK2Q9UPX8 REXO2-216ENST00000544196 452 ntTSL 3 BASIC30.61■■■□□ 2.49
SHANK2Q9UPX8 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC30.61■■■□□ 2.49
SHANK2Q9UPX8 MIR2861-201ENST00000636310 90 ntBASIC30.61■■■□□ 2.49
SHANK2Q9UPX8 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC30.61■■■□□ 2.49
SHANK2Q9UPX8 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
SHANK2Q9UPX8 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC30.61■■■□□ 2.49
SHANK2Q9UPX8 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SHANK2Q9UPX8 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC30.6■■■□□ 2.49
SHANK2Q9UPX8 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC30.6■■■□□ 2.49
SHANK2Q9UPX8 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC30.6■■■□□ 2.49
SHANK2Q9UPX8 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
SHANK2Q9UPX8 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SHANK2Q9UPX8 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC30.6■■■□□ 2.49
SHANK2Q9UPX8 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SHANK2Q9UPX8 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC30.6■■■□□ 2.49
SHANK2Q9UPX8 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC30.6■■■□□ 2.49
SHANK2Q9UPX8 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
SHANK2Q9UPX8 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
SHANK2Q9UPX8 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
SHANK2Q9UPX8 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
SHANK2Q9UPX8 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC30.59■■■□□ 2.49
SHANK2Q9UPX8 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC30.59■■■□□ 2.49
SHANK2Q9UPX8 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
SHANK2Q9UPX8 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
SHANK2Q9UPX8 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC30.59■■■□□ 2.49
SHANK2Q9UPX8 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC30.59■■■□□ 2.49
SHANK2Q9UPX8 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
SHANK2Q9UPX8 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC30.59■■■□□ 2.49
SHANK2Q9UPX8 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC30.59■■■□□ 2.49
SHANK2Q9UPX8 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
SHANK2Q9UPX8 KRT8P36-201ENST00000489121 1440 ntBASIC30.59■■■□□ 2.49
SHANK2Q9UPX8 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC30.59■■■□□ 2.49
SHANK2Q9UPX8 AC027702.1-201ENST00000563810 1770 ntBASIC30.59■■■□□ 2.49
SHANK2Q9UPX8 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC30.58■■■□□ 2.49
SHANK2Q9UPX8 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SHANK2Q9UPX8 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SHANK2Q9UPX8 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
SHANK2Q9UPX8 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC30.58■■■□□ 2.49
SHANK2Q9UPX8 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC30.58■■■□□ 2.49
SHANK2Q9UPX8 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SHANK2Q9UPX8 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
SHANK2Q9UPX8 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SHANK2Q9UPX8 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SHANK2Q9UPX8 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
SHANK2Q9UPX8 AC023632.3-201ENST00000521633 145 ntBASIC30.57■■■□□ 2.48
SHANK2Q9UPX8 AC006557.6-201ENST00000623071 864 ntBASIC30.57■■■□□ 2.48
SHANK2Q9UPX8 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
SHANK2Q9UPX8 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
SHANK2Q9UPX8 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC30.57■■■□□ 2.48
SHANK2Q9UPX8 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
SHANK2Q9UPX8 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
SHANK2Q9UPX8 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
SHANK2Q9UPX8 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC30.57■■■□□ 2.48
SHANK2Q9UPX8 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC30.57■■■□□ 2.48
SHANK2Q9UPX8 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
SHANK2Q9UPX8 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC30.57■■■□□ 2.48
SHANK2Q9UPX8 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC30.57■■■□□ 2.48
SHANK2Q9UPX8 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC30.57■■■□□ 2.48
SHANK2Q9UPX8 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC30.57■■■□□ 2.48
SHANK2Q9UPX8 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC30.57■■■□□ 2.48
SHANK2Q9UPX8 Z98882.1-201ENST00000622160 2253 ntBASIC30.56■■■□□ 2.48
SHANK2Q9UPX8 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
SHANK2Q9UPX8 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC30.56■■■□□ 2.48
SHANK2Q9UPX8 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC30.56■■■□□ 2.48
SHANK2Q9UPX8 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC30.56■■■□□ 2.48
SHANK2Q9UPX8 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC30.56■■■□□ 2.48
SHANK2Q9UPX8 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
SHANK2Q9UPX8 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC30.55■■■□□ 2.48
SHANK2Q9UPX8 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC30.55■■■□□ 2.48
SHANK2Q9UPX8 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
SHANK2Q9UPX8 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
SHANK2Q9UPX8 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC30.55■■■□□ 2.48
SHANK2Q9UPX8 RPS2P55-201ENST00000397318 883 ntBASIC30.55■■■□□ 2.48
SHANK2Q9UPX8 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
SHANK2Q9UPX8 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC30.55■■■□□ 2.48
SHANK2Q9UPX8 AC107956.1-201ENST00000494359 873 ntBASIC30.55■■■□□ 2.48
SHANK2Q9UPX8 AL023875.1-201ENST00000640777 796 ntBASIC30.55■■■□□ 2.48
SHANK2Q9UPX8 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
SHANK2Q9UPX8 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC30.55■■■□□ 2.48
SHANK2Q9UPX8 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
SHANK2Q9UPX8 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC30.54■■■□□ 2.48
SHANK2Q9UPX8 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
SHANK2Q9UPX8 KRASP1-201ENST00000407852 552 ntBASIC30.54■■■□□ 2.48
SHANK2Q9UPX8 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC30.54■■■□□ 2.48
SHANK2Q9UPX8 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
SHANK2Q9UPX8 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC30.54■■■□□ 2.48
SHANK2Q9UPX8 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms