Protein–RNA interactions for Protein: Q9UPT9

USP22, Ubiquitin carboxyl-terminal hydrolase 22, humanhuman

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP22Q9UPT9 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.26■□□□□ 0.67
USP22Q9UPT9 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
USP22Q9UPT9 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP22Q9UPT9 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.26■□□□□ 0.67
USP22Q9UPT9 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP22Q9UPT9 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.26■□□□□ 0.67
USP22Q9UPT9 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP22Q9UPT9 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP22Q9UPT9 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP22Q9UPT9 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP22Q9UPT9 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP22Q9UPT9 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP22Q9UPT9 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
USP22Q9UPT9 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP22Q9UPT9 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.25■□□□□ 0.67
USP22Q9UPT9 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP22Q9UPT9 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
USP22Q9UPT9 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
USP22Q9UPT9 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.25■□□□□ 0.67
USP22Q9UPT9 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.25■□□□□ 0.67
USP22Q9UPT9 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.25■□□□□ 0.67
USP22Q9UPT9 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP22Q9UPT9 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
USP22Q9UPT9 AP001330.3-201ENST00000520123 633 ntBASIC19.25■□□□□ 0.67
USP22Q9UPT9 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP22Q9UPT9 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP22Q9UPT9 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP22Q9UPT9 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP22Q9UPT9 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP22Q9UPT9 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.25■□□□□ 0.67
USP22Q9UPT9 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP22Q9UPT9 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP22Q9UPT9 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
USP22Q9UPT9 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP22Q9UPT9 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
USP22Q9UPT9 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP22Q9UPT9 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP22Q9UPT9 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP22Q9UPT9 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP22Q9UPT9 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.24■□□□□ 0.67
USP22Q9UPT9 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
USP22Q9UPT9 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP22Q9UPT9 AC027682.1-201ENST00000562846 899 ntBASIC19.24■□□□□ 0.67
USP22Q9UPT9 AC005837.3-201ENST00000612163 286 ntBASIC19.24■□□□□ 0.67
USP22Q9UPT9 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.24■□□□□ 0.67
USP22Q9UPT9 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.24■□□□□ 0.67
USP22Q9UPT9 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP22Q9UPT9 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP22Q9UPT9 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
USP22Q9UPT9 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
USP22Q9UPT9 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
USP22Q9UPT9 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USP22Q9UPT9 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP22Q9UPT9 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.23■□□□□ 0.67
USP22Q9UPT9 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP22Q9UPT9 AC142381.2-201ENST00000566120 298 ntBASIC19.23■□□□□ 0.67
USP22Q9UPT9 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.23■□□□□ 0.67
USP22Q9UPT9 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.23■□□□□ 0.67
USP22Q9UPT9 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USP22Q9UPT9 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USP22Q9UPT9 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP22Q9UPT9 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP22Q9UPT9 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.23■□□□□ 0.67
USP22Q9UPT9 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP22Q9UPT9 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP22Q9UPT9 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP22Q9UPT9 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP22Q9UPT9 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.22■□□□□ 0.67
USP22Q9UPT9 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.22■□□□□ 0.67
USP22Q9UPT9 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP22Q9UPT9 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP22Q9UPT9 TPRG1LP1-201ENST00000598702 760 ntBASIC19.22■□□□□ 0.67
USP22Q9UPT9 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP22Q9UPT9 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP22Q9UPT9 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP22Q9UPT9 AC098818.2-201ENST00000564925 2320 ntBASIC19.22■□□□□ 0.67
USP22Q9UPT9 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP22Q9UPT9 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP22Q9UPT9 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.21■□□□□ 0.67
USP22Q9UPT9 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP22Q9UPT9 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP22Q9UPT9 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
USP22Q9UPT9 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.21■□□□□ 0.67
USP22Q9UPT9 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.21■□□□□ 0.67
USP22Q9UPT9 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.21■□□□□ 0.67
USP22Q9UPT9 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP22Q9UPT9 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.21■□□□□ 0.67
USP22Q9UPT9 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP22Q9UPT9 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.21■□□□□ 0.67
USP22Q9UPT9 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.21■□□□□ 0.67
USP22Q9UPT9 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.21■□□□□ 0.67
USP22Q9UPT9 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.21■□□□□ 0.67
USP22Q9UPT9 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.21■□□□□ 0.67
USP22Q9UPT9 AF213884.3-201ENST00000563833 479 ntBASIC19.21■□□□□ 0.67
USP22Q9UPT9 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.21■□□□□ 0.67
USP22Q9UPT9 AL031432.3-201ENST00000607698 485 ntBASIC19.21■□□□□ 0.67
USP22Q9UPT9 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP22Q9UPT9 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP22Q9UPT9 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP22Q9UPT9 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms