Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
VPS29Q9UBQ0 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.57■□□□□ 0.72
VPS29Q9UBQ0 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.57■□□□□ 0.72
VPS29Q9UBQ0 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VPS29Q9UBQ0 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.57■□□□□ 0.72
VPS29Q9UBQ0 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
VPS29Q9UBQ0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
VPS29Q9UBQ0 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
VPS29Q9UBQ0 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.57■□□□□ 0.72
VPS29Q9UBQ0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.57■□□□□ 0.72
VPS29Q9UBQ0 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
VPS29Q9UBQ0 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VPS29Q9UBQ0 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VPS29Q9UBQ0 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.56■□□□□ 0.72
VPS29Q9UBQ0 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
VPS29Q9UBQ0 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
VPS29Q9UBQ0 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
VPS29Q9UBQ0 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.56■□□□□ 0.72
VPS29Q9UBQ0 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
VPS29Q9UBQ0 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VPS29Q9UBQ0 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.56■□□□□ 0.72
VPS29Q9UBQ0 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
VPS29Q9UBQ0 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
VPS29Q9UBQ0 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
VPS29Q9UBQ0 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.56■□□□□ 0.72
VPS29Q9UBQ0 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.56■□□□□ 0.72
VPS29Q9UBQ0 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.56■□□□□ 0.72
VPS29Q9UBQ0 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.56■□□□□ 0.72
VPS29Q9UBQ0 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.56■□□□□ 0.72
VPS29Q9UBQ0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
VPS29Q9UBQ0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VPS29Q9UBQ0 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
VPS29Q9UBQ0 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VPS29Q9UBQ0 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
VPS29Q9UBQ0 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
VPS29Q9UBQ0 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VPS29Q9UBQ0 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VPS29Q9UBQ0 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
VPS29Q9UBQ0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.55■□□□□ 0.72
VPS29Q9UBQ0 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.55■□□□□ 0.72
VPS29Q9UBQ0 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.55■□□□□ 0.72
VPS29Q9UBQ0 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VPS29Q9UBQ0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VPS29Q9UBQ0 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VPS29Q9UBQ0 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VPS29Q9UBQ0 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
VPS29Q9UBQ0 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VPS29Q9UBQ0 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
VPS29Q9UBQ0 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
VPS29Q9UBQ0 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VPS29Q9UBQ0 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VPS29Q9UBQ0 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.54■□□□□ 0.72
VPS29Q9UBQ0 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
VPS29Q9UBQ0 KRT18P11-201ENST00000435214 1283 ntBASIC19.54■□□□□ 0.72
VPS29Q9UBQ0 TERF1P5-201ENST00000477545 1207 ntBASIC19.54■□□□□ 0.72
VPS29Q9UBQ0 AC010536.3-201ENST00000620306 533 ntBASIC19.54■□□□□ 0.72
VPS29Q9UBQ0 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.54■□□□□ 0.72
VPS29Q9UBQ0 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VPS29Q9UBQ0 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VPS29Q9UBQ0 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.54■□□□□ 0.72
VPS29Q9UBQ0 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
VPS29Q9UBQ0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VPS29Q9UBQ0 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VPS29Q9UBQ0 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VPS29Q9UBQ0 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VPS29Q9UBQ0 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VPS29Q9UBQ0 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VPS29Q9UBQ0 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
VPS29Q9UBQ0 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
VPS29Q9UBQ0 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.53■□□□□ 0.72
VPS29Q9UBQ0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS29Q9UBQ0 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.53■□□□□ 0.72
VPS29Q9UBQ0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.53■□□□□ 0.72
VPS29Q9UBQ0 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.53■□□□□ 0.72
VPS29Q9UBQ0 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS29Q9UBQ0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS29Q9UBQ0 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS29Q9UBQ0 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VPS29Q9UBQ0 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.53■□□□□ 0.72
VPS29Q9UBQ0 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VPS29Q9UBQ0 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.53■□□□□ 0.72
VPS29Q9UBQ0 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.53■□□□□ 0.72
VPS29Q9UBQ0 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
VPS29Q9UBQ0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.53■□□□□ 0.72
VPS29Q9UBQ0 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.53■□□□□ 0.72
VPS29Q9UBQ0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.53■□□□□ 0.72
VPS29Q9UBQ0 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.53■□□□□ 0.72
VPS29Q9UBQ0 FAM21FP-204ENST00000608637 956 ntBASIC19.53■□□□□ 0.72
VPS29Q9UBQ0 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VPS29Q9UBQ0 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.53■□□□□ 0.72
VPS29Q9UBQ0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS29Q9UBQ0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.53■□□□□ 0.72
VPS29Q9UBQ0 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.53■□□□□ 0.72
VPS29Q9UBQ0 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.53■□□□□ 0.72
VPS29Q9UBQ0 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS29Q9UBQ0 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VPS29Q9UBQ0 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS29Q9UBQ0 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VPS29Q9UBQ0 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.52■□□□□ 0.72
VPS29Q9UBQ0 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms