Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
THUMPD1Q9NXG2 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
THUMPD1Q9NXG2 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
THUMPD1Q9NXG2 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.17■□□□□ 0.66
THUMPD1Q9NXG2 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.17■□□□□ 0.66
THUMPD1Q9NXG2 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
THUMPD1Q9NXG2 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
THUMPD1Q9NXG2 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
THUMPD1Q9NXG2 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
THUMPD1Q9NXG2 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
THUMPD1Q9NXG2 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
THUMPD1Q9NXG2 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
THUMPD1Q9NXG2 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
THUMPD1Q9NXG2 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
THUMPD1Q9NXG2 YBX1P1-201ENST00000445822 960 ntBASIC19.16■□□□□ 0.66
THUMPD1Q9NXG2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
THUMPD1Q9NXG2 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.16■□□□□ 0.66
THUMPD1Q9NXG2 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.16■□□□□ 0.66
THUMPD1Q9NXG2 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
THUMPD1Q9NXG2 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.16■□□□□ 0.66
THUMPD1Q9NXG2 AL512408.1-201ENST00000569378 2000 ntBASIC19.16■□□□□ 0.66
THUMPD1Q9NXG2 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.16■□□□□ 0.66
THUMPD1Q9NXG2 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
THUMPD1Q9NXG2 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
THUMPD1Q9NXG2 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
THUMPD1Q9NXG2 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.15■□□□□ 0.66
THUMPD1Q9NXG2 AC092720.2-201ENST00000602388 1665 ntBASIC19.15■□□□□ 0.66
THUMPD1Q9NXG2 AL162377.1-201ENST00000618844 1793 ntBASIC19.15■□□□□ 0.66
THUMPD1Q9NXG2 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
THUMPD1Q9NXG2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
THUMPD1Q9NXG2 SLC7A5P1-201ENST00000568957 537 ntBASIC19.15■□□□□ 0.66
THUMPD1Q9NXG2 TERF1P2-201ENST00000583350 1212 ntBASIC19.15■□□□□ 0.66
THUMPD1Q9NXG2 AC104187.1-201ENST00000607510 612 ntBASIC19.15■□□□□ 0.66
THUMPD1Q9NXG2 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.15■□□□□ 0.66
THUMPD1Q9NXG2 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
THUMPD1Q9NXG2 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
THUMPD1Q9NXG2 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
THUMPD1Q9NXG2 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
THUMPD1Q9NXG2 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
THUMPD1Q9NXG2 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
THUMPD1Q9NXG2 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
THUMPD1Q9NXG2 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.15■□□□□ 0.66
THUMPD1Q9NXG2 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
THUMPD1Q9NXG2 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
THUMPD1Q9NXG2 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.14■□□□□ 0.66
THUMPD1Q9NXG2 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
THUMPD1Q9NXG2 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
THUMPD1Q9NXG2 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
THUMPD1Q9NXG2 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
THUMPD1Q9NXG2 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
THUMPD1Q9NXG2 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.14■□□□□ 0.65
THUMPD1Q9NXG2 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
THUMPD1Q9NXG2 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
THUMPD1Q9NXG2 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
THUMPD1Q9NXG2 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.14■□□□□ 0.65
THUMPD1Q9NXG2 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
THUMPD1Q9NXG2 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
THUMPD1Q9NXG2 MIR638-201ENST00000385237 100 ntBASIC19.14■□□□□ 0.65
THUMPD1Q9NXG2 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.14■□□□□ 0.65
THUMPD1Q9NXG2 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.14■□□□□ 0.65
THUMPD1Q9NXG2 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.14■□□□□ 0.65
THUMPD1Q9NXG2 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.14■□□□□ 0.65
THUMPD1Q9NXG2 AC243732.1-201ENST00000612648 864 ntBASIC19.14■□□□□ 0.65
THUMPD1Q9NXG2 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
THUMPD1Q9NXG2 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
THUMPD1Q9NXG2 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
THUMPD1Q9NXG2 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
THUMPD1Q9NXG2 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
THUMPD1Q9NXG2 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
THUMPD1Q9NXG2 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
THUMPD1Q9NXG2 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.13■□□□□ 0.65
THUMPD1Q9NXG2 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
THUMPD1Q9NXG2 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.13■□□□□ 0.65
THUMPD1Q9NXG2 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
THUMPD1Q9NXG2 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
THUMPD1Q9NXG2 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.13■□□□□ 0.65
THUMPD1Q9NXG2 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.13■□□□□ 0.65
THUMPD1Q9NXG2 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
THUMPD1Q9NXG2 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
THUMPD1Q9NXG2 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.13■□□□□ 0.65
THUMPD1Q9NXG2 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.13■□□□□ 0.65
THUMPD1Q9NXG2 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
THUMPD1Q9NXG2 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.13■□□□□ 0.65
THUMPD1Q9NXG2 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.13■□□□□ 0.65
THUMPD1Q9NXG2 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
THUMPD1Q9NXG2 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
THUMPD1Q9NXG2 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.13■□□□□ 0.65
THUMPD1Q9NXG2 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
THUMPD1Q9NXG2 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
THUMPD1Q9NXG2 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
THUMPD1Q9NXG2 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.13■□□□□ 0.65
THUMPD1Q9NXG2 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
THUMPD1Q9NXG2 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
THUMPD1Q9NXG2 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.13■□□□□ 0.65
THUMPD1Q9NXG2 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.13■□□□□ 0.65
THUMPD1Q9NXG2 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
THUMPD1Q9NXG2 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.13■□□□□ 0.65
THUMPD1Q9NXG2 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.12■□□□□ 0.65
THUMPD1Q9NXG2 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.12■□□□□ 0.65
THUMPD1Q9NXG2 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms