Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHCHD3Q9NX63 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHCHD3Q9NX63 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHCHD3Q9NX63 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.9■□□□□ 0.62
CHCHD3Q9NX63 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHCHD3Q9NX63 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.9■□□□□ 0.62
CHCHD3Q9NX63 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.9■□□□□ 0.62
CHCHD3Q9NX63 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.9■□□□□ 0.62
CHCHD3Q9NX63 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CHCHD3Q9NX63 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CHCHD3Q9NX63 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CHCHD3Q9NX63 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHCHD3Q9NX63 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CHCHD3Q9NX63 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CHCHD3Q9NX63 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHCHD3Q9NX63 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CHCHD3Q9NX63 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.89■□□□□ 0.61
CHCHD3Q9NX63 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.89■□□□□ 0.61
CHCHD3Q9NX63 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHCHD3Q9NX63 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHCHD3Q9NX63 AC104581.1-202ENST00000635932 2618 ntBASIC18.89■□□□□ 0.61
CHCHD3Q9NX63 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.89■□□□□ 0.61
CHCHD3Q9NX63 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CHCHD3Q9NX63 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHCHD3Q9NX63 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHCHD3Q9NX63 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.89■□□□□ 0.61
CHCHD3Q9NX63 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.89■□□□□ 0.61
CHCHD3Q9NX63 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHCHD3Q9NX63 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHCHD3Q9NX63 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.89■□□□□ 0.61
CHCHD3Q9NX63 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.89■□□□□ 0.61
CHCHD3Q9NX63 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.89■□□□□ 0.61
CHCHD3Q9NX63 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHCHD3Q9NX63 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHCHD3Q9NX63 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CHCHD3Q9NX63 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.88■□□□□ 0.61
CHCHD3Q9NX63 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CHCHD3Q9NX63 Z92544.1-202ENST00000571933 1220 ntBASIC18.88■□□□□ 0.61
CHCHD3Q9NX63 AL117332.1-201ENST00000622628 974 ntBASIC18.88■□□□□ 0.61
CHCHD3Q9NX63 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHCHD3Q9NX63 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHCHD3Q9NX63 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.88■□□□□ 0.61
CHCHD3Q9NX63 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHCHD3Q9NX63 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHCHD3Q9NX63 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHCHD3Q9NX63 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHCHD3Q9NX63 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.88■□□□□ 0.61
CHCHD3Q9NX63 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
CHCHD3Q9NX63 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHCHD3Q9NX63 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.88■□□□□ 0.61
CHCHD3Q9NX63 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CHCHD3Q9NX63 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHCHD3Q9NX63 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHCHD3Q9NX63 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHCHD3Q9NX63 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHCHD3Q9NX63 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHCHD3Q9NX63 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.87■□□□□ 0.61
CHCHD3Q9NX63 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHCHD3Q9NX63 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHCHD3Q9NX63 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CHCHD3Q9NX63 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHCHD3Q9NX63 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHCHD3Q9NX63 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHCHD3Q9NX63 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHCHD3Q9NX63 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.87■□□□□ 0.61
CHCHD3Q9NX63 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.87■□□□□ 0.61
CHCHD3Q9NX63 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.87■□□□□ 0.61
CHCHD3Q9NX63 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CHCHD3Q9NX63 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHCHD3Q9NX63 AP005212.1-201ENST00000581547 1997 ntBASIC18.87■□□□□ 0.61
CHCHD3Q9NX63 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.87■□□□□ 0.61
CHCHD3Q9NX63 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CHCHD3Q9NX63 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHCHD3Q9NX63 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHCHD3Q9NX63 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHCHD3Q9NX63 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHCHD3Q9NX63 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.86■□□□□ 0.61
CHCHD3Q9NX63 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHCHD3Q9NX63 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.86■□□□□ 0.61
CHCHD3Q9NX63 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CHCHD3Q9NX63 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHCHD3Q9NX63 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.86■□□□□ 0.61
CHCHD3Q9NX63 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CHCHD3Q9NX63 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHCHD3Q9NX63 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHCHD3Q9NX63 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHCHD3Q9NX63 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.86■□□□□ 0.61
CHCHD3Q9NX63 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHCHD3Q9NX63 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.86■□□□□ 0.61
CHCHD3Q9NX63 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHCHD3Q9NX63 AC010141.3-201ENST00000456659 717 ntBASIC18.86■□□□□ 0.61
CHCHD3Q9NX63 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
CHCHD3Q9NX63 AC010997.5-201ENST00000609182 354 ntBASIC18.86■□□□□ 0.61
CHCHD3Q9NX63 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHCHD3Q9NX63 AP000974.1-201ENST00000623909 2387 ntBASIC18.86■□□□□ 0.61
CHCHD3Q9NX63 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHCHD3Q9NX63 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHCHD3Q9NX63 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.86■□□□□ 0.61
CHCHD3Q9NX63 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
CHCHD3Q9NX63 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms